Propagation of ArgR regulog to Glaciecola sp. HTCC2999

Reference regulog properties
Source regulog:	ArgR - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	ArgR
Regulation mode:	repressor (activator)
Biological process:	Arginine degradation; Arginine biosynthesis
Effector:	Arginine
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Glaciecola sp. HTCC2999
Orthologous TF(s)	GHTCC_010100007107
Regulated genes	7

Built upon 502 sites [see more]

Predicted regulatory interactions in *Glaciecola sp. HTCC2999*
	Locus tag	Position	Score	Sequence
Position: -259 Score: 5 Sequence: AATGAATATTTATACATT Position: -238 Score: 4 Sequence: TTTGCATAAATATTATAT Locus tag: GHTCC_010100002119
	GHTCC_010100002119	-259	5	AATGAATATTTATACATT
		-238	4	TTTGCATAAATATTATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Shewanella oneidensis MR-1	SO_0275	-327	3.6	ATTGAAATATTAAGTAGT
		-249	4	TAAAAATATATATTCACA
		-127	3.7	AGTGAATAAAATAACAAG
Shewanella putrefaciens CN-32	Sputcn32_3717	-192	4.2	TATGAAAATAAATTAAAA
		-57	3.8	AGTGAATAAAATAACAAC
Shewanella sp W3-18-1	Sputw3181_3860	-193	4.2	TATGAAAATAAATTAAAA
		-180	4	TAAAAATATATATTCACA
		-57	4	AGTGAATAAAATAACAAT
Shewanella sp ANA-3	Shewana3_3905	-357	3.7	ACTGATTTTTCAGTCTTT
		-327	4.4	ACTGAGTTATTAAGCAGT
		-249	4	TAAAAATATATATTCACA
Shewanella sp MR-4	Shewmr4_3709	-327	4.4	ACTGAGTTATTAAGCAGT
		-249	4	TAAAAATATATATTCACA
Shewanella sp MR-7	Shewmr7_0236	-327	4.4	ACTGAGTTATTAAGCAGT
		-249	4	TAAAAATATATATTCACA
Shewanella baltica OS155	Sbal_4124	-471	4.2	ATTCAATATAAATGCGAA
		-252	4	TAAAAATATATATTCACA
		-130	3.8	AGTGAATAAAATAACAAC
Shewanella denitrificans OS217	Sden_0250	-235	4.3	AATAAATATGTATTCACA
		-214	3.7	ATTGCATAACAATTTGAT
		-145	4.3	ATCGAATATAAAAGCACA
Shewanella amazonensis SB2B	Sama_0256	-241	3.7	AATAGATATTCATGCATA
Shewanella loihica PV-4	Shew_0202	-249	3.7	TAAAAATATCTATTCAAT
		-228	3.5	ATTGCATAATTAGTTTGT
Shewanella pealeana ATCC 700345	Spea_0227	-266	3.8	CCCAAATATATATTCAAA
Shewanella halifaxensis HAW-EB4	Shal_4093	-267	4.5	CCTAAATATATATTCAAA
Shewanella piezotolerans WP3	swp_2055	-266	4.5	CCTAAATATATATTCAAA
Shewanella sediminis HAW-EB3	Ssed_4276	-256	4	GTAAAATATATATTCAAA
		-235	3.5	ATTGCATAATTAGTTTGT
Shewanella woodyi ATCC 51908	Swoo_0329	-423	3.5	TTTGCATTCAAAACCAAG
		-263	4	GTAAAATATATATTCAAA

Position: -46 Score: 3.9 Sequence: ACTGTATATATTTACACA Position: -27 Score: 4 Sequence: ATTGTATATTTACACAGT Locus tag: GHTCC_010100008506
	GHTCC_010100008506	-46	3.9	ACTGTATATATTTACACA
		-27	4	ATTGTATATTTACACAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: recN
Ortholog function: DNA repair protein RecN
Shewanella oneidensis MR-1	SO_3462	-71	4.6	ACTGTATATAAAATCAGT
		-49	3.7	ACTGTTTATCAATACAGT
Shewanella putrefaciens CN-32	Sputcn32_2771	-71	4.6	ACTGTATATAAAATCAGT
		-49	3.7	ACTGTTTATCAATACAGT
Shewanella sp W3-18-1	Sputw3181_1241	-71	4.6	ACTGTATATAAAATCAGT
		-49	3.7	ACTGTTTATCAATACAGT
Shewanella sp ANA-3	Shewana3_1104	-71	5.1	ACTGTATATAAATTCAGT
		-49	3.7	ACTGTTTATCAATACAGT
Shewanella sp MR-4	Shewmr4_1104	-71	5.1	ACTGTATATAAATTCAGT
		-49	3.7	ACTGTTTATCAATACAGT
Shewanella sp MR-7	Shewmr7_1170	-71	5.1	ACTGTATATAAATTCAGT
		-49	3.7	ACTGTTTATCAATACAGT
Shewanella baltica OS155	Sbal_3153	-137	3.6	CATGCATAATCAGTTAAT
		-71	4.6	ACTGTATATAAAATCAGT
		-49	3.7	ACTGTTTATCAATACAGT
Shewanella denitrificans OS217	Sden_1151	-95	3.7	ACTCAAAATTAACTCAGC
		-70	3.9	ACTGTATAAAAAACCAGT
		-48	3.7	ACTGTTTATCAATACAGT
Shewanella frigidimarina NCIMB 400	Sfri_1043	-112	3.6	GATGATAAAATAGTCAAC
		-71	4.6	ACTGTATATAAAATCAGT
		-49	3.7	ACTGTTTATCAATACAGT
Shewanella amazonensis SB2B	Sama_1026	-72	3.8	ACTGTACAAAAAATCAGT
		-50	3.7	ACTGTGTATCAATACAGT
Shewanella loihica PV-4	Shew_1196	-61	5.1	ACTGTATAAAAATTCAGT
Shewanella sediminis HAW-EB3	Ssed_1281	-61	4.6	ACTGTATATAAAATCAGT

Position: -80 Score: 4.2 Sequence: ATTCAATAATCACTCAAT Locus tag: GHTCC_010100011118
	GHTCC_010100011118	-80	4.2	ATTCAATAATCACTCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4732
Ortholog function: Conserved hypothetical protein
Shewanella oneidensis MR-1	SO_4732	-106	4.2	TTTAAATTCACATTCAGT
Shewanella putrefaciens CN-32	Sputcn32_3915	-112	5.3	GATGCATTTAAATTCACA
Shewanella sp W3-18-1	Sputw3181_0037	-112	5.3	GATGCATTTAAATTCACA
Shewanella sp ANA-3	Shewana3_4118	-106	4.2	TTTAAATTCACATTCAGT
Shewanella sp MR-4	Shewmr4_3913	-106	4.2	TTTAAATTCACATTCAGT
Shewanella sp MR-7	Shewmr7_4005	-106	4.2	TTTAAATTCACATTCAGT
Shewanella baltica OS155	Sbal_0045	-112	4.8	AACGCATTTAAATTCACA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of ArgR regulog to Glaciecola sp. HTCC2999

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --