Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CueR regulog to Shewanella violacea DSS12

Reference regulog properties
Source regulog: CueR - Shewanellaceae
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: activator (repressor)
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Proteobacteria/Gamma
Propagated regulon:
Target genome Shewanella violacea DSS12
Orthologous TF(s) SVI_3095
Regulated genes 1
Built upon 26 sites [see more]
Predicted regulatory interactions in Shewanella violacea DSS12
Locus tag Position Score Sequence
Position: -86
Score: 6
Locus tag: SVI_3093
Supported by regulated orthologs from reference regulons
Ortholog gene name: copA
Ortholog function: Copper-translocating P-type ATPase (EC
Shewanella oneidensis MR-1 SO_1689 -65 6.5 ACTCTCCCGTGATGGGAGACT
Shewanella putrefaciens CN-32 Sputcn32_1408 -65 6.5 ACTCTCCCGTGATGGGAGACT
Shewanella sp W3-18-1 Sputw3181_2693 -65 6.5 ACTCTCCCGTGATGGGAGACT
Shewanella sp ANA-3 Shewana3_2761 -65 6.5 ACTCTCCCGTGATGGGAGACT
Shewanella sp MR-4 Shewmr4_2587 -65 6.5 ACTCTCCCGTGATGGGAGACT
Shewanella sp MR-7 Shewmr7_2654 -65 6.5 ACTCTCCCGTGATGGGAGACT
Shewanella baltica OS155 Sbal_1505 -65 6.2 ACTCTCCCGCAATGGGAGACT
Shewanella pealeana ATCC 700345 Spea_2772 -63 5.1 ACTCTCCCCCTGTAGGAGACA
Shewanella halifaxensis HAW-EB4 Shal_2867 -62 6 ACTCTCCCCTTATGGGAGACA
Shewanella piezotolerans WP3 swp_3377 -73 6 ACTCTCCCCTTATGGGAGACA
Shewanella sediminis HAW-EB3 Ssed_1485 -80 6 ACTCTCCCATTAGGGGAGACA
Shewanella woodyi ATCC 51908 Swoo_3191 -81 5.8 ACCCTCCCATAAGGGGAGACA