Propagation of ArgR regulog to Shewanella violacea DSS12
| Source regulog: | ArgR - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | ArgR |
| Regulation mode: | repressor (activator) |
| Biological process: | Arginine degradation; Arginine biosynthesis |
| Effector: | Arginine |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Shewanella violacea DSS12 |
| Orthologous TF(s) | SVI_0783 |
| Regulated genes | 20 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -125
Score: 4.9 Sequence: CTTGAATTTTTATTCAAG
Locus tag: SVI_0783
|
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| SVI_0783 | -125 | 4.9 | CTTGAATTTTTATTCAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argR | ||||
| Ortholog function: Arginine metabolism transcriptional regulator ArgR | ||||
| Shewanella oneidensis MR-1 | SO_0769 | -93 | 5.5 | ATTGCATTTTTATTCAGT |
| Shewanella putrefaciens CN-32 | Sputcn32_3220 | -96 | 5.5 | AGTGAATTTTTATTCAAC |
| Shewanella sp W3-18-1 | Sputw3181_0721 | -96 | 5.5 | AGTGAATTTTTATTCAAC |
| Shewanella sp ANA-3 | Shewana3_3510 | -93 | 5.5 | ATTGCATTTTTATTCAGT |
| Shewanella sp MR-4 | Shewmr4_3340 | -93 | 5.5 | ATTGCATTTTTATTCAGT |
| Shewanella sp MR-7 | Shewmr7_0613 | -93 | 5.2 | ACTGCATTTTTATTCATC |
| Shewanella baltica OS155 | Sbal_0608 | -96 | 5.5 | AGTGAATTTTTATTCAAC |
| Shewanella denitrificans OS217 | Sden_0825 | -89 | 5.7 | AGTGAATTTTTATTCACT |
| Shewanella frigidimarina NCIMB 400 | Sfri_0640 | -104 | 5.6 | AATGAATTTTTATTCAAT |
| Shewanella amazonensis SB2B | Sama_0671 | -98 | 5.3 | TCTGCATTTTTATTCACA |
| Shewanella loihica PV-4 | Shew_0866 | -95 | 5.1 | CCTGAATTTTTATTCACA |
| Shewanella pealeana ATCC 700345 | Spea_0849 | -95 | 5.5 | AATGAATTTTTATTCAGA |
| Shewanella halifaxensis HAW-EB4 | Shal_0902 | -95 | 5.5 | AATGAATTTTTATTCACA |
| Shewanella piezotolerans WP3 | swp_4101 | -95 | 5.3 | CATGAATTTTTATTCAAT |
| Shewanella sediminis HAW-EB3 | Ssed_0951 | -95 | 5.2 | GTTGCATTTTTATTCATA |
| Shewanella woodyi ATCC 51908 | Swoo_1001 | -95 | 5 | ATTGCATTCTTATTCATT |
|
Position: -336
Score: 4.5 Sequence: CATGCATAAATACTCACA
Position: -312
Score: 4.4 Sequence: ATTCAAAAATAATTCACT
Locus tag: SVI_0915
|
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| SVI_0915 | -336 | 4.5 | CATGCATAAATACTCACA | |
| -312 | 4.4 | ATTCAAAAATAATTCACT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltB | ||||
| Ortholog function: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | ||||
| Shewanella oneidensis MR-1 | SO_1325 | -359 | 4.5 | AAAGAATAACAATTCACT |
| -313 | 4.3 | TTTGCAATAAAAATCACT | ||
| Shewanella putrefaciens CN-32 | Sputcn32_1136 | -358 | 4.7 | GAAGAATAAAAATTCACT |
| -312 | 4.3 | TTTGCAATAAAAATCACT | ||
| Shewanella sp W3-18-1 | Sputw3181_3028 | -358 | 4.8 | GGAGAATAAAAATTCACT |
| -312 | 4.3 | TTTGCAATAAAAATCACT | ||
| Shewanella sp ANA-3 | Shewana3_3050 | -360 | 4.5 | ATAGAATAACAATTCATT |
| -339 | 4 | TATAAATTTTTATACATC | ||
| -314 | 4.3 | TTTGCAATAAAAATCACT | ||
| Shewanella sp MR-4 | Shewmr4_2872 | -359 | 4.5 | AAAGAATAACAATTCACT |
| -313 | 4.3 | TTTGCAATAAAAATCACT | ||
| Shewanella sp MR-7 | Shewmr7_2954 | -359 | 4.5 | AAAGAATAACAATTCACT |
| -313 | 4.3 | TTTGCAATAAAAATCACT | ||
| Shewanella baltica OS155 | Sbal_1178 | -361 | 5.3 | AATGAATAATAATTCAAC |
| -315 | 4.3 | TTTGCAATAAAAATCACT | ||
| Shewanella denitrificans OS217 | Sden_2790 | -359 | 5.1 | AGTGAATATTTAGTCAGT |
| Shewanella frigidimarina NCIMB 400 | Sfri_2951 | -358 | 5 | AATGAATATTTAATCATT |
| -312 | 4.3 | TTTAAAATAAAATTCACT | ||
| Shewanella amazonensis SB2B | Sama_0857 | -362 | 4.6 | TTTGAATAGTTAATCAAT |
| -316 | 4 | CCTGCAAAAAAAATCACT | ||
| Shewanella loihica PV-4 | Shew_1032 | -324 | 3.8 | TTTGTTAAATAATTCACT |
| -303 | 4.3 | TATGCAATAAAAATCACT | ||
| Shewanella pealeana ATCC 700345 | Spea_1013 | -354 | 4.9 | AATGCATAAATAGTCACA |
| -330 | 4.3 | AGTGATTATCATTTCACT | ||
| -309 | 4.3 | TCTGCAAAAAAAATCACT | ||
| Shewanella halifaxensis HAW-EB4 | Shal_1061 | -355 | 4.6 | TATGCATAAATAAGCAAA |
| -331 | 3.8 | AGTGACTACCATTTCACT | ||
| -310 | 4 | TCTGCAAGAAAAATCACT | ||
| Shewanella piezotolerans WP3 | swp_3803 | -355 | 4.4 | TCTGCATAATTAGTCAAG |
| -331 | 4.3 | AGTGACTATCATTTCACT | ||
| -310 | 4.3 | TTTGCAATAAAAATCACT | ||
| Shewanella sediminis HAW-EB3 | Ssed_1126 | -301 | 4.1 | CGTGCAAAAAAAATCACT |
| -127 | 4.3 | ACTCAAATTTTATGCAAT | ||
| -62 | 3.8 | GGTGAATATCTATACTAA | ||
| Shewanella woodyi ATCC 51908 | Swoo_1221 | -349 | 4.7 | ACTGCATAAATAAGCAAA |
| -314 | 3.9 | ATTCATTATATTTGCAAT | ||
|
Position: -162
Score: 4 Sequence: TATGCCTGTTGATGCAAT
Position: -136
Score: 4.4 Sequence: AGTCAATATTATTTCATT
Locus tag: SVI_1785
|
||||
| SVI_1785 | -162 | 4 | TATGCCTGTTGATGCAAT | |
| -136 | 4.4 | AGTCAATATTATTTCATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO2753 | ||||
| Ortholog function: Prolyl endopeptidase (EC 3.4.21.26) | ||||
| Shewanella oneidensis MR-1 | SO_2753 | -445 | 4.1 | AATGCATTTGCAATCAAC |
| -173 | 5 | AATGCATAAAAATACACT | ||
| Shewanella putrefaciens CN-32 | Sputcn32_1602 | -444 | 4.1 | AATGCATTTGCAATCAAC |
| -193 | 3.6 | AATAACTTATCAATCAGT | ||
| -172 | 5 | AGTGCATAAAAATACATT | ||
| Shewanella sp W3-18-1 | Sputw3181_2420 | -444 | 4.1 | AATGCATTTGCAATCAAC |
| -193 | 3.6 | AATAACTTATCAATCAGT | ||
| -172 | 5 | AGTGCATAAAAATACATT | ||
| Shewanella sp ANA-3 | Shewana3_2536 | -444 | 4.1 | AATGCATTTGCAATCAAC |
| -172 | 5 | AATGCATAAAAATACACT | ||
| Shewanella sp MR-4 | Shewmr4_2373 | -445 | 4.1 | AATGCATTTGCAATCAAC |
| -182 | 4.2 | AGTCAAAATTAATGCATA | ||
| -172 | 5 | AATGCATAAAAATACACT | ||
| Shewanella sp MR-7 | Shewmr7_2445 | -445 | 4.1 | AATGCATTTGCAATCAAC |
| -172 | 5 | AATGCATAAAAATACACT | ||
| Shewanella baltica OS155 | Sbal_1741 | -444 | 4.1 | AATGCATTTGCAATCAAC |
| -192 | 3.9 | AATAACTTATAAATCACT | ||
| -171 | 4.9 | AGTGCATAATAATACACT | ||
| Shewanella pealeana ATCC 700345 | Spea_2569 | -297 | 4.2 | ATTGAATAAAGATGAACT |
| -215 | 3.9 | CATGATATTTAATTCATC | ||
| Shewanella halifaxensis HAW-EB4 | Shal_1686 | -230 | 3.9 | CATGATATTTAATTCATC |
|
Position: -266
Score: 4.3 Sequence: ACTGAATTTAAATCCTGT
Position: -102
Score: 3.8 Sequence: TATCAATATCAATTAACA
Locus tag: SVI_2344
|
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| SVI_2344 | -266 | 4.3 | ACTGAATTTAAATCCTGT | |
| -102 | 3.8 | TATCAATATCAATTAACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: omp(Arg) | ||||
| Ortholog function: TonB-dependent receptor | ||||
| Shewanella oneidensis MR-1 | SO_2427 | -383 | 4.7 | TATGCATATTTTTTCATT |
| -204 | 3.7 | TATGTGTAAGCATTCAAT | ||
| Shewanella putrefaciens CN-32 | Sputcn32_1940 | -478 | 4 | TGTGCATAAAAATTACAT |
| Shewanella sp W3-18-1 | Sputw3181_2068 | -517 | 3.8 | GATGCATATTTGTTAATT |
| -478 | 4 | TGTGCATAAAAATTACAT | ||
| Shewanella sp ANA-3 | Shewana3_1958 | -468 | 3.9 | AATCACAATTTATTCATT |
| -384 | 3.8 | TATGCATATTTCTCCATA | ||
| -106 | 3.6 | ACTGAATGAAAGTGAATC | ||
| Shewanella sp MR-4 | Shewmr4_1903 | -457 | 3.5 | AATCACAAGTTATTCATT |
| -373 | 3.6 | CGTGCATAATTAATCGAC | ||
| -105 | 3.6 | ACTGAATGAAAGTGAATC | ||
| Shewanella sp MR-7 | Shewmr7_2075 | -457 | 3.5 | AATCACAAGTTATTCATT |
| -373 | 3.9 | TGTGCATAATTAATCGAC | ||
| -105 | 3.6 | ACTGAATGAAAGTGAATC | ||
| Shewanella baltica OS155 | Sbal_2044 | -487 | 3.8 | TTTGCATAAATATTACAA |
| -390 | 3.5 | TGTCTATAGCTATGCATT | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_2416 | -451 | 4.9 | TCTGAATAAATACTCAGT |
| -72 | 4.2 | ACTGACCAATTATTCATA | ||
| Shewanella amazonensis SB2B | Sama_1838 | -201 | 5.5 | TTTGAATAAATATTCAGT |
| Shewanella loihica PV-4 | Shew_2074 | -609 | 4.7 | AGTGCATTTAAATTGAAG |
| Shewanella piezotolerans WP3 | swp_2362 | -612 | 4 | TGTGATTTTTAATGCCTC |
| -393 | 3.7 | AGTTCATTTAATATCAAA | ||
| Shewanella sediminis HAW-EB3 | Ssed_2036 | -287 | 3.6 | TTTGCATGGTTAGTGAAA |
| Shewanella woodyi ATCC 51908 | Swoo_2565 | -598 | 3.9 | TGTGCATATAATTTAATC |
| -551 | 4.3 | GATGAGTATATATTGATT | ||
|
Position: -259
Score: 4.1 Sequence: ATTCCATTATTAGTCATC
Position: -227
Score: 4.3 Sequence: TGTGCATTTCGATGCAAA
Locus tag: SVI_2771
|
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| SVI_2771 | -259 | 4.1 | ATTCCATTATTAGTCATC | |
| -227 | 4.3 | TGTGCATTTCGATGCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: astB | ||||
| Ortholog function: Succinylarginine dihydrolase (EC 3.5.3.23) | ||||
| Shewanella oneidensis MR-1 | SO_2706 | -227 | 4 | AGTCACTTTTTAATCAAA |
| -142 | 3.6 | AAGAAATAGTTATGCATT | ||
| -40 | 4.1 | TTTGAATAAATAATAACC | ||
| Shewanella putrefaciens CN-32 | Sputcn32_2251 | -225 | 4 | AGTCACTTTTTAATCAAA |
| -131 | 4.2 | TATGCATTTATCGTCAAA | ||
| Shewanella sp W3-18-1 | Sputw3181_1757 | -225 | 4 | AGTCACTTTTTAATCAAA |
| -131 | 4.2 | TATGCATTTATCGTCAAA | ||
| Shewanella sp ANA-3 | Shewana3_1728 | -227 | 4 | AGTCACTTTTTAATCAAA |
| -132 | 3.6 | TATGCATTTATCGTGAAA | ||
| -40 | 4.1 | TTTGAATAAATAATAACC | ||
| Shewanella sp MR-4 | Shewmr4_1584 | -227 | 4 | AGTCACTTTTTAATCAAA |
| -142 | 3.6 | AAGAAATAGTTATGCATT | ||
| Shewanella sp MR-7 | Shewmr7_1659 | -227 | 4 | AGTCACTTTTTAATCAAA |
| -142 | 3.6 | AAGAAATAGTTATGCATT | ||
| Shewanella baltica OS155 | Sbal_2497 | -226 | 4 | AGTCACTTTTTAATCAAA |
| -132 | 3.6 | TATGCATTTATCGTGAAA | ||
| -40 | 3.6 | TATGAACAAATAATAACT | ||
| Shewanella denitrificans OS217 | Sden_2329 | -201 | 4.7 | CTTGCATTTTTAATCACT |
| Shewanella frigidimarina NCIMB 400 | Sfri_2479 | -186 | 5 | AGTGCATTTTTAGTCATT |
| Shewanella amazonensis SB2B | Sama_1321 | -233 | 4.1 | AGTCACTTTTTAATCAAT |
| -147 | 3.6 | AAGCAATAGTTATGCAAA | ||
| Shewanella pealeana ATCC 700345 | Spea_1534 | -137 | 5 | TGTGCATTTCAATTCAAA |
| Shewanella halifaxensis HAW-EB4 | Shal_1604 | -169 | 4.1 | ATTTCATTAATAGTCATC |
| -137 | 4.6 | TGTGCATTTTGATGCAAA | ||
| Shewanella piezotolerans WP3 | swp_1743 | -167 | 4 | ATTTCATTATTAGTCATC |
| -135 | 4.6 | TGTGCATTTTGATGCAAA | ||
| Shewanella sediminis HAW-EB3 | Ssed_2842 | -354 | 4 | ATTTCATTATTAGTCATC |
| -322 | 4.3 | TGTGCATTTCGATGCAAA | ||
| Shewanella woodyi ATCC 51908 | Swoo_1802 | -236 | 4 | ATTTCATTATTAGTCATC |
| -204 | 5 | TGTGAATTTCAATGCAAA | ||
|
Position: -238
Score: 4.7 Sequence: ACAGCATAAAAATTCACA
Locus tag: SVI_2920
|
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| SVI_2920 | -238 | 4.7 | ACAGCATAAAAATTCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aprE | ||||
| Ortholog function: Alkaline serine protease | ||||
| Shewanella putrefaciens CN-32 | Sputcn32_2477 | -156 | 5.6 | ATTGAATTTTTATTCACA |
| Shewanella sp W3-18-1 | Sputw3181_1531 | -156 | 5.6 | ATTGAATTTTTATTCACA |
| Shewanella sp ANA-3 | Shewana3_1443 | -190 | 4.7 | CATGAGTATTTATTCATT |
| Shewanella sp MR-4 | Shewmr4_1390 | -190 | 4.9 | TATGAGTATTTATTCATT |
| -123 | 3.8 | ATTTAATTTACAAACACT | ||
| Shewanella sp MR-7 | Shewmr7_1455 | -190 | 4.9 | TATGAGTATTTATTCATT |
| -123 | 3.8 | ATTTAATTTACAAACACT | ||
| Shewanella baltica OS155 | Sbal_2779 | -189 | 5.4 | GTTGAATTTATATTCACA |
| Shewanella frigidimarina NCIMB 400 | Sfri_2692 | -190 | 5.4 | GTTGAATTTTAATTCAAA |
| Shewanella amazonensis SB2B | Sama_2185 | -236 | 4.3 | TCCGAATATTCATTCAGC |
| -185 | 4.5 | TTTGCATAAATATTCTAA | ||
| Shewanella loihica PV-4 | Shew_2443 | -229 | 4.2 | TTCGAATAAATACTCAAA |
| -166 | 4.5 | TCTGCATAAAAATGCTCT | ||
| Shewanella sediminis HAW-EB3 | Ssed_1611 | -187 | 4.2 | ACGCAATATTTATTCAGT |
| Shewanella woodyi ATCC 51908 | Swoo_3041 | -240 | 4.2 | GTCGCATATTAATTCAGG |
|
Position: -58
Score: 4.6 Sequence: ACTGTATATAAAATCAGT
Locus tag: SVI_3184
|
||||
| SVI_3184 | -58 | 4.6 | ACTGTATATAAAATCAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: recN | ||||
| Ortholog function: DNA repair protein RecN | ||||
| Shewanella oneidensis MR-1 | SO_3462 | -71 | 4.6 | ACTGTATATAAAATCAGT |
| -49 | 3.7 | ACTGTTTATCAATACAGT | ||
| Shewanella putrefaciens CN-32 | Sputcn32_2771 | -71 | 4.6 | ACTGTATATAAAATCAGT |
| -49 | 3.7 | ACTGTTTATCAATACAGT | ||
| Shewanella sp W3-18-1 | Sputw3181_1241 | -71 | 4.6 | ACTGTATATAAAATCAGT |
| -49 | 3.7 | ACTGTTTATCAATACAGT | ||
| Shewanella sp ANA-3 | Shewana3_1104 | -71 | 5.1 | ACTGTATATAAATTCAGT |
| -49 | 3.7 | ACTGTTTATCAATACAGT | ||
| Shewanella sp MR-4 | Shewmr4_1104 | -71 | 5.1 | ACTGTATATAAATTCAGT |
| -49 | 3.7 | ACTGTTTATCAATACAGT | ||
| Shewanella sp MR-7 | Shewmr7_1170 | -71 | 5.1 | ACTGTATATAAATTCAGT |
| -49 | 3.7 | ACTGTTTATCAATACAGT | ||
| Shewanella baltica OS155 | Sbal_3153 | -137 | 3.6 | CATGCATAATCAGTTAAT |
| -71 | 4.6 | ACTGTATATAAAATCAGT | ||
| -49 | 3.7 | ACTGTTTATCAATACAGT | ||
| Shewanella denitrificans OS217 | Sden_1151 | -95 | 3.7 | ACTCAAAATTAACTCAGC |
| -70 | 3.9 | ACTGTATAAAAAACCAGT | ||
| -48 | 3.7 | ACTGTTTATCAATACAGT | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_1043 | -112 | 3.6 | GATGATAAAATAGTCAAC |
| -71 | 4.6 | ACTGTATATAAAATCAGT | ||
| -49 | 3.7 | ACTGTTTATCAATACAGT | ||
| Shewanella amazonensis SB2B | Sama_1026 | -72 | 3.8 | ACTGTACAAAAAATCAGT |
| -50 | 3.7 | ACTGTGTATCAATACAGT | ||
| Shewanella loihica PV-4 | Shew_1196 | -61 | 5.1 | ACTGTATAAAAATTCAGT |
| Shewanella sediminis HAW-EB3 | Ssed_1281 | -61 | 4.6 | ACTGTATATAAAATCAGT |
|
Position: -88
Score: 4.9 Sequence: TTTGAATGGATATTCAAA
Locus tag: SVI_3244
|
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| SVI_3244 | -88 | 4.9 | TTTGAATGGATATTCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argW | ||||
| Ortholog function: Predicted arginine uptake transporter, COG3314 family | ||||
| Shewanella oneidensis MR-1 | SO_1245 | -99 | 4.8 | GTTGAATGAAAATGCAGC |
| Shewanella putrefaciens CN-32 | Sputcn32_2808 | -124 | 4.9 | GTTGAATGAAAATGCACC |
| Shewanella sp W3-18-1 | Sputw3181_1204 | -124 | 4.9 | GTTGAATGAAAATGCACC |
| Shewanella sp ANA-3 | Shewana3_1062 | -99 | 4.9 | GTTGAATGAAAATGCACC |
| Shewanella sp MR-4 | Shewmr4_1058 | -98 | 4.8 | GTTGAATGAAAATGCATC |
| Shewanella sp MR-7 | Shewmr7_1129 | -98 | 4.8 | GTTGAATGAAAATGCATC |
| Shewanella baltica OS155 | Sbal_3205 | -99 | 5.2 | GTTGAATTTAAATGCACC |
| Shewanella denitrificans OS217 | Sden_1037 | -98 | 4.1 | ACTCTATTTTTATGCAGC |
| Shewanella frigidimarina NCIMB 400 | Sfri_1012 | -88 | 4.8 | ACTGAATGGACATTCAAT |
| Shewanella amazonensis SB2B | Sama_0994 | -102 | 4.2 | CCTGCATGGACATGCACT |
| Shewanella loihica PV-4 | Shew_2790 | -90 | 4.5 | CATGAATGGATATTCAGA |
| Shewanella pealeana ATCC 700345 | Spea_3024 | -93 | 4.9 | GTTGAATGGATATTCAAT |
| Shewanella halifaxensis HAW-EB4 | Shal_3114 | -91 | 4.9 | GTTGAATGGATATTCAAT |
| Shewanella piezotolerans WP3 | swp_1256 | -90 | 5.2 | GTTGAATGAATATTCAAT |
| Shewanella sediminis HAW-EB3 | Ssed_3353 | -58 | 4.8 | TTTGAATGGATATTCATA |
| Shewanella woodyi ATCC 51908 | Swoo_3520 | -89 | 4.6 | CATGAATGGATATTCAGT |
|
Position: -87
Score: 5.3 Sequence: TGTGCATTAAAATGCAAT
Locus tag: SVI_4056
|
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| SVI_4056 | -87 | 5.3 | TGTGCATTAAAATGCAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argA | ||||
| Ortholog function: N-acetylglutamate synthase (EC 2.3.1.1) | ||||
| Shewanella oneidensis MR-1 | SO_4245 | -141 | 4.3 | TTTGAAAATATAAGCACT |
| -79 | 5.4 | GGTGAATTAAAATGCAAT | ||
| Shewanella putrefaciens CN-32 | Sputcn32_0465 | -117 | 3.9 | AGTGAGAATAAATTCTTT |
| -96 | 5.5 | TGTGAATTAAAATGCAAT | ||
| Shewanella sp W3-18-1 | Sputw3181_0368 | -117 | 3.9 | AGTGAGAATAAATTCTTT |
| -96 | 5.5 | TGTGAATTAAAATGCAAT | ||
| Shewanella sp ANA-3 | Shewana3_3767 | -141 | 4.3 | TTTGAAAATATAAGCACT |
| -79 | 5.4 | GGTGAATTAAAATGCAAT | ||
| Shewanella sp MR-4 | Shewmr4_3594 | -141 | 4.3 | TTTGAAAATATAAGCACT |
| -79 | 5.4 | GGTGAATTAAAATGCAAT | ||
| Shewanella sp MR-7 | Shewmr7_0362 | -100 | 3.8 | AATGAGAATAAATTCTTT |
| -79 | 5.4 | GGTGAATTAAAATGCAAT | ||
| Shewanella baltica OS155 | Sbal_0380 | -118 | 3.8 | AATGAGAATAAATTCTTT |
| -97 | 5.5 | TGTGAATTAAAATGCAAT | ||
| Shewanella denitrificans OS217 | Sden_0329 | -212 | 4.3 | TCTGTAATAAAATGCACT |
| -144 | 5.4 | ACTGCATTAAAATGCAAT | ||
| -123 | 4 | ATTGCGTTTTTATTGATG | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_3825 | -130 | 4.2 | AGTGAAATAAAATGCTTT |
| -109 | 5.6 | AGTGAATTAAAATGCAAT | ||
| Shewanella amazonensis SB2B | Sama_0330 | -86 | 5.7 | TGTGAATTTAAATTCACT |
| Shewanella loihica PV-4 | Shew_3478 | -80 | 5.5 | TGTGAATTTAAATGCAAT |
| Shewanella pealeana ATCC 700345 | Spea_3834 | -120 | 4.3 | AGTGAAAATAAATGCTTT |
| -99 | 5.6 | AATGAATTTAAATGCAAT | ||
| -34 | 4.4 | GGTGAATATCTATTTATT | ||
| Shewanella halifaxensis HAW-EB4 | Shal_0432 | -100 | 5.6 | AATGAATTTAAATGCACT |
| Shewanella piezotolerans WP3 | swp_2207 | -110 | 3.7 | AGTGATAATAAATGCTTT |
| -89 | 5.4 | ATTGCATTAAAATGCAAT | ||
| Shewanella sediminis HAW-EB3 | Ssed_0388 | -199 | 4.9 | ACTCAATAAAAATTCACA |
| -88 | 5.3 | TTTGCATTAAAATGCAAT | ||
| Shewanella woodyi ATCC 51908 | Swoo_4558 | -198 | 4.9 | TGTGAAAAAATATTCAGT |
| -84 | 5.6 | AGTGAATTAAAATGCAAT | ||