Propagation of Fnr regulog to Psychromonas ingrahamii 37
| Source regulog: | Fnr - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | |
| Biological process: | Anaerobic metabolism |
| Effector: | Oxygen |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Psychromonas ingrahamii 37 |
| Orthologous TF(s) | Ping_0931 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -81
Score: 4.9 Sequence: TTGATCTAGATTAA
Locus tag: Ping_0700
|
||||
| Ping_0700 | -81 | 4.9 | TTGATCTAGATTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompW | ||||
| Ortholog function: Outer membrane protein W precursor | ||||
| Shewanella amazonensis SB2B | Sama_1371 | -105 | 5.2 | TTGATTTGGATCAA |
| Shewanella baltica OS155 | Sbal_1490 | -103 | 5.2 | TTGATTTGGATCAA |
| Shewanella denitrificans OS217 | Sden_2589 | -153 | 4.5 | GTGAATTAGATCAA |
| -103 | 5.3 | TTGATCCAGATCAA | ||
| Shewanella frigidimarina NCIMB 400 | Sfri_1334 | -166 | 4.6 | GTGATCCAAATCAA |
| -105 | 5.3 | TTGATCTAAATCAA | ||
| Shewanella halifaxensis HAW-EB4 | Shal_2887 | -107 | 4.4 | TTGATTCAGGTCAA |
| Shewanella oneidensis MR-1 | SO1673 | -293 | 4.3 | TTGATGTAAATGAA |
| -106 | 5.2 | TTGATTTGGATCAA | ||
| Shewanella pealeana ATCC 700345 | Spea_2787 | -155 | 4.3 | GTGATCTAGATCCT |
| -104 | 5.3 | TTGATTTAGATCAA | ||
| Shewanella piezotolerans WP3 | swp_3395 | -107 | 5.6 | TTGATCTAGATCAA |
| Shewanella putrefaciens CN-32 | Sputcn32_1392 | -103 | 5.3 | TTGATTTAGATCAA |
| Shewanella sediminis HAW-EB3 | Ssed_1469 | -154 | 3.8 | GTGAGCTTGGTCAT |
| -104 | 5.6 | TTGATCTGGATCAA | ||
| Shewanella sp ANA-3 | Shewana3_2775 | -103 | 5.2 | TTGATTTGGATCAA |
| Shewanella sp MR-4 | Shewmr4_2601 | -103 | 5.2 | TTGATTTGGATCAA |
| Shewanella sp MR-7 | Shewmr7_2668 | -103 | 5.2 | TTGATTTGGATCAA |
| Shewanella sp W3-18-1 | Sputw3181_2709 | -103 | 5.3 | TTGATTTAGATCAA |
| Shewanella woodyi ATCC 51908 | Swoo_3207 | -154 | 4.1 | GTGAGTTCGATCAA |
| -104 | 5.2 | TTGATTTGGATCAA | ||
|
Position: -119
Score: 4 Sequence: ATGATCCATGTCAA
Locus tag: Ping_2449
|
||||
| Ping_2449 | -119 | 4 | ATGATCCATGTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydhD | ||||
| Ortholog function: Glutaredoxin-related protein | ||||
| Shewanella amazonensis SB2B | Sama_1919 | -169 | 4.5 | GTGATGTGAATCAT |
| Shewanella baltica OS155 | Sbal_1783 | -152 | 4.5 | GTGATGTGAATCAT |
| Shewanella denitrificans OS217 | Sden_1640 | -133 | 4.5 | GTGATGTGCATCAT |
| Shewanella frigidimarina NCIMB 400 | Sfri_1748 | -151 | 4.5 | GTGATGTGAATCAT |
| Shewanella halifaxensis HAW-EB4 | Shal_2335 | -150 | 3.9 | GTGAAGTGTATCAT |
| Shewanella loihica PV-4 | Shew_1835 | -160 | 4.5 | GTGATGTGAATCAT |
| Shewanella oneidensis MR-1 | SO2880 | -153 | 4.5 | GTGATGTGAATCAT |
| Shewanella pealeana ATCC 700345 | Spea_1964 | -150 | 3.9 | GTGAAGTGTATCAT |
| Shewanella piezotolerans WP3 | swp_2753 | -149 | 3.9 | GTGAAGTGTATCAT |
| Shewanella putrefaciens CN-32 | Sputcn32_1688 | -152 | 4.5 | GTGATGTGAATCAT |
| Shewanella sp ANA-3 | Shewana3_1640 | -153 | 4.5 | GTGATGTGAATCAT |
| Shewanella sp MR-4 | Shewmr4_1573 | -153 | 4.5 | GTGATGTGAATCAT |
| Shewanella sp MR-7 | Shewmr7_1648 | -153 | 4.5 | GTGATGTGAATCAT |
| Shewanella sp W3-18-1 | Sputw3181_2337 | -152 | 4.5 | GTGATGTGAATCAT |