Propagation of ArgR regulog to Psychromonas ingrahamii 37

Reference regulog properties
Source regulog:	ArgR - Shewanellaceae
Regulator type:	Transcription factor
Regulator family:	ArgR
Regulation mode:	repressor (activator)
Biological process:	Arginine degradation; Arginine biosynthesis
Effector:	Arginine
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Psychromonas ingrahamii 37
Orthologous TF(s)	Ping_0295
Regulated genes	10

Built upon 502 sites [see more]

Predicted regulatory interactions in *Psychromonas ingrahamii 37*
	Locus tag	Position	Score	Sequence
Position: -164 Score: 3.6 Sequence: ACTGCTTTAATAAGCTAT Position: -113 Score: 3.7 Sequence: GTTAAGTAAGTATTCATT Position: -102 Score: 3.7 Sequence: ATTCATTATTATTGCATA Position: -92 Score: 4.9 Sequence: ATTGCATAAATAATCAAA Locus tag: Ping_0228
	Ping_0228	-164	3.6	ACTGCTTTAATAAGCTAT
		-113	3.7	GTTAAGTAAGTATTCATT
		-102	3.7	ATTCATTATTATTGCATA
		-92	4.9	ATTGCATAAATAATCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Shewanella oneidensis MR-1	SO_0275	-327	3.6	ATTGAAATATTAAGTAGT
		-249	4	TAAAAATATATATTCACA
		-127	3.7	AGTGAATAAAATAACAAG
Shewanella putrefaciens CN-32	Sputcn32_3717	-192	4.2	TATGAAAATAAATTAAAA
		-57	3.8	AGTGAATAAAATAACAAC
Shewanella sp W3-18-1	Sputw3181_3860	-193	4.2	TATGAAAATAAATTAAAA
		-180	4	TAAAAATATATATTCACA
		-57	4	AGTGAATAAAATAACAAT
Shewanella sp ANA-3	Shewana3_3905	-357	3.7	ACTGATTTTTCAGTCTTT
		-327	4.4	ACTGAGTTATTAAGCAGT
		-249	4	TAAAAATATATATTCACA
Shewanella sp MR-4	Shewmr4_3709	-327	4.4	ACTGAGTTATTAAGCAGT
		-249	4	TAAAAATATATATTCACA
Shewanella sp MR-7	Shewmr7_0236	-327	4.4	ACTGAGTTATTAAGCAGT
		-249	4	TAAAAATATATATTCACA
Shewanella baltica OS155	Sbal_4124	-471	4.2	ATTCAATATAAATGCGAA
		-252	4	TAAAAATATATATTCACA
		-130	3.8	AGTGAATAAAATAACAAC
Shewanella denitrificans OS217	Sden_0250	-235	4.3	AATAAATATGTATTCACA
		-214	3.7	ATTGCATAACAATTTGAT
		-145	4.3	ATCGAATATAAAAGCACA
Shewanella amazonensis SB2B	Sama_0256	-241	3.7	AATAGATATTCATGCATA
Shewanella loihica PV-4	Shew_0202	-249	3.7	TAAAAATATCTATTCAAT
		-228	3.5	ATTGCATAATTAGTTTGT
Shewanella pealeana ATCC 700345	Spea_0227	-266	3.8	CCCAAATATATATTCAAA
Shewanella halifaxensis HAW-EB4	Shal_4093	-267	4.5	CCTAAATATATATTCAAA
Shewanella piezotolerans WP3	swp_2055	-266	4.5	CCTAAATATATATTCAAA
Shewanella sediminis HAW-EB3	Ssed_4276	-256	4	GTAAAATATATATTCAAA
		-235	3.5	ATTGCATAATTAGTTTGT
Shewanella woodyi ATCC 51908	Swoo_0329	-423	3.5	TTTGCATTCAAAACCAAG
		-263	4	GTAAAATATATATTCAAA

Position: -96 Score: 5.1 Sequence: ATTGAATAGTTATGCATT Locus tag: Ping_0295
	Ping_0295	-96	5.1	ATTGAATAGTTATGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argR
Ortholog function: Arginine metabolism transcriptional regulator ArgR
Shewanella oneidensis MR-1	SO_0769	-93	5.5	ATTGCATTTTTATTCAGT
Shewanella putrefaciens CN-32	Sputcn32_3220	-96	5.5	AGTGAATTTTTATTCAAC
Shewanella sp W3-18-1	Sputw3181_0721	-96	5.5	AGTGAATTTTTATTCAAC
Shewanella sp ANA-3	Shewana3_3510	-93	5.5	ATTGCATTTTTATTCAGT
Shewanella sp MR-4	Shewmr4_3340	-93	5.5	ATTGCATTTTTATTCAGT
Shewanella sp MR-7	Shewmr7_0613	-93	5.2	ACTGCATTTTTATTCATC
Shewanella baltica OS155	Sbal_0608	-96	5.5	AGTGAATTTTTATTCAAC
Shewanella denitrificans OS217	Sden_0825	-89	5.7	AGTGAATTTTTATTCACT
Shewanella frigidimarina NCIMB 400	Sfri_0640	-104	5.6	AATGAATTTTTATTCAAT
Shewanella amazonensis SB2B	Sama_0671	-98	5.3	TCTGCATTTTTATTCACA
Shewanella loihica PV-4	Shew_0866	-95	5.1	CCTGAATTTTTATTCACA
Shewanella pealeana ATCC 700345	Spea_0849	-95	5.5	AATGAATTTTTATTCAGA
Shewanella halifaxensis HAW-EB4	Shal_0902	-95	5.5	AATGAATTTTTATTCACA
Shewanella piezotolerans WP3	swp_4101	-95	5.3	CATGAATTTTTATTCAAT
Shewanella sediminis HAW-EB3	Ssed_0951	-95	5.2	GTTGCATTTTTATTCATA
Shewanella woodyi ATCC 51908	Swoo_1001	-95	5	ATTGCATTCTTATTCATT

Position: -254 Score: 5.1 Sequence: GCTGCATTAAAATGCAGT Locus tag: Ping_2119
	Ping_2119	-254	5.1	GCTGCATTAAAATGCAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO0762
Ortholog function: Isochorismate hydrolase (EC 3.3.2.1)
Shewanella oneidensis MR-1	SO_0762	-195	4.6	TGTGCCTAAAAATGCACC
Shewanella sp ANA-3	Shewana3_3533	-234	3.9	ATTGATTTTAAATAAATA
		-195	4.1	ACCGATTAAAAATGCACC
Shewanella sp MR-4	Shewmr4_3363	-248	3.8	CCAGAATTTTAATTTATT
		-194	4	TTCGATTAAAAATGCACC
Shewanella sp MR-7	Shewmr7_0590	-265	3.8	CCAGAATTTTAATTTATT
		-211	4	TTCGATTAAAAATGCACC
Shewanella frigidimarina NCIMB 400	Sfri_0893	-114	4.4	TCTGAGTGAACATTCATA
Shewanella loihica PV-4	Shew_0845	-139	5	GCTGCATATAAATGCACC
Shewanella pealeana ATCC 700345	Spea_0832	-152	4.9	CGTGCATATAAATGCACC
Shewanella halifaxensis HAW-EB4	Shal_0887	-155	4.4	AACGCATAAAAATGCACC
Shewanella piezotolerans WP3	swp_3957	-151	4.5	TATAAATATAAATGCACC
Shewanella woodyi ATCC 51908	Swoo_0978	-125	4.2	TGCGCATAAAAACTCAAT

Position: -147 Score: 4 Sequence: GGTGCGGTTTAATGCACT Position: -75 Score: 5.5 Sequence: TTTGAATATTTATTCATT Locus tag: Ping_3377
	Ping_3377	-147	4	GGTGCGGTTTAATGCACT
		-75	5.5	TTTGAATATTTATTCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: oadG
Ortholog function: Oxaloacetate decarboxylase gamma chain (EC 4.1.1.3)
Shewanella putrefaciens CN-32	Sputcn32_1029	-265	4.3	TATCCTTATAAATTCACT
		-154	4.3	TGTGAATATTTAGTCTTT
		-133	4	TGTGATTTTATATGCTGC
Shewanella sp W3-18-1	Sputw3181_3136	-265	4.3	TATCCTTATAAATTCACT
		-154	4.3	TGTGAATATTTAGTCTTT
		-133	4	TGTGATTTTATATGCTGC
Shewanella sp MR-7	Shewmr7_3069	-322	3.9	ATTCAATTTAAAGGCCAT
		-176	3.7	AACGAATGTTCATTTAAT
Shewanella baltica OS155	Sbal_1024	-139	4.9	TGTGATTTTTTATTCAAA
Shewanella frigidimarina NCIMB 400	Sfri_1065	-182	3.8	GTTGAATAATCGTTGAGT
		-165	4.6	TTTGAATATTTATGCTTT
Shewanella amazonensis SB2B	Sama_1051	-352	4.1	ACTGCATATACTTCCACT
		-307	3.6	TCTGCCCATGAATGCAGT
Shewanella loihica PV-4	Shew_1219	-377	4.3	ATTGCATAATCTTGCATA
		-331	4	ATTCAATTTTCAAGCAGA
Shewanella pealeana ATCC 700345	Spea_1198	-73	4.2	TGTGAATGAATAGTGAAT
		-62	4.1	AGTGAATATTTATTTTTA
Shewanella halifaxensis HAW-EB4	Shal_1235	-63	4.8	GGTGAATATTTATTGAGT
		-43	4.1	CATCCATGTTTATTCACA
Shewanella piezotolerans WP3	swp_1378	-157	3.6	TATCAACAGAAATGCATA
		-136	4.4	TGTGAATAAATAGTGATT
Shewanella sediminis HAW-EB3	Ssed_1320	-322	4.4	ACTGCATAACTTTTCATT
Shewanella woodyi ATCC 51908	Swoo_3337	-110	4.4	AATGAATAAAAAGTTATT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of ArgR regulog to Psychromonas ingrahamii 37

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --