Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of PurR regulog to Geobacillus sp. Y412MC61

Reference regulog properties
Source regulog: PurR - Bacillales
Regulator type: Transcription factor
Regulator family: PurR
Regulation mode: repressor
Biological process: Purine metabolism
Effector: 5-phosphoribosyl 1-pyrophosphate
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. Y412MC61
Orthologous TF(s) GYMC61_0040
Regulated genes 6
Built upon 102 sites [see more]
Predicted regulatory interactions in Geobacillus sp. Y412MC61
Locus tag Position Score Sequence
Position: -63
Score: 8.4
Sequence: TTTTCCGAAAAATA-(17)-GAATGTTCGTTTTT
Locus tag: GYMC61_0246
GYMC61_0246 -63 8.4 TTTTCCGAAAAATA-(17)-GAATGTTCGTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nusB
Ortholog function: Transcription termination factor
Bacillus subtilis subsp. subtilis str. 168 BSU24320 -149 9 AAATCCGAATAATC-(16)-AAATATTCGGTAAT
Bacillus amyloliquefaciens FZB42 RBAM_022650 -149 8.9 AAATCCGAATGAAA-(16)-AAATATTCGGCATT
Bacillus pumilus SAFR-032 BPUM_2164 -145 8.2 ATTTCCGAATCATA-(16)-AATGATTCGTTTTT
Bacillus licheniformis DSM 13 BLi02603 -152 9.5 AAAAACGAATGATA-(16)-TATTATTCGGTTAT
Geobacillus kaustophilus HTA426 GK2397 -63 8.4 TTTTCCGAAAAATA-(17)-GAATGTTCGTTTTT
Bacillus cereus ATCC 14579 BC4181 -219 6.7 AAAAACGTACATTG-(17)-TGAAGTTAATCTTT
Bacillus halodurans C-125 BH2785 -129 7.9 GAAAACGAAAGTTG-(17)-AATTGTTCTGTTTT
Position: -301
Score: 9.6
Sequence: AAACACGAACATTT-(16)-AAATGTTCGATTTT
Locus tag: GYMC61_1129
GYMC61_1129 -301 9.6 AAACACGAACATTT-(16)-AAATGTTCGATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purE
Ortholog function: Phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Bacillus subtilis subsp. subtilis str. 168 BSU06420 -323 9 AAACACGAACATTA-(16)-TATCGTTCGATAAT
Bacillus amyloliquefaciens FZB42 RBAM_006840 -314 9 AAACACGAACATTA-(16)-TATCGTTCGATAAT
Bacillus pumilus SAFR-032 BPUM_0596 -352 8.6 AAATCCGAACATTA-(16)-GATTGTTCGATAAA
Bacillus licheniformis DSM 13 BLi00693 -319 8.9 AAACCCGAACATTA-(16)-TATCGTTCGATAAT
Anoxybacillus flavithermus WK1 Aflv_0228 -295 7.1 AAAATCCGAACATT-(17)-AAATGTTCGATTTT
-294 9.7 AAATCCGAACATTA-(16)-AAATGTTCGATTTT
Geobacillus kaustophilus HTA426 GK0257 -302 9.6 AAACACGAACATTT-(16)-AAATGTTCGATTTT
Bacillus cereus ATCC 14579 BC0323 -295 9 AAACACGAACGTTA-(16)-AAACATTCGATTAT
Bacillus halodurans C-125 BH0623 -353 9.4 AAAAACGAACATTG-(16)-TATTGTTCGAGTTT
Bacillus clausii KSM-K16 ABC1024 -470 6.8 AATGCCGAAAACAA-(16)-TTTGGTTCGTTGTT
-305 9 AAAAACGAACAATG-(16)-AAATGTTCGACTAT
Oceanobacillus iheyensis HTE831 OB0739 -360 8.7 AAACCCGAACGTTA-(16)-AATCATACGAGTTT
-342 7.3 AAAACTTTACAAAA-(17)-GATTTTTCGTATTT
Paenibacillus sp. JDR-2 Pjdr2_0860 -411 9.6 AAAAACGAACTTTA-(17)-TAATGTTCGTATTT
Position: -313
Score: 9.4
Sequence: ATAAACGAATGATT-(16)-TAATGTTCGTGTTT
Locus tag: GYMC61_2387
GYMC61_2387 -313 9.4 ATAAACGAATGATT-(16)-TAATGTTCGTGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xpt
Ortholog function: Xanthine phosphoribosyltransferase (EC 2.4.2.22)
Bacillus subtilis subsp. subtilis str. 168 BSU22070 -279 8.6 AAATACGAATGATA-(16)-TAAAGTTCGGGAAT
Bacillus amyloliquefaciens FZB42 RBAM_020260 -287 8.5 AAACACGAATAATC-(16)-AAAAGTTCGGAAAT
Bacillus pumilus SAFR-032 BPUM_1944 -301 8.9 AAAAACGAACGTTT-(16)-TTAAGTTCGGTATT
Bacillus licheniformis DSM 13 BLi02348 -302 8 AAATACGAACGTTC-(16)-GCAGGTTCGTCTTT
Bacillus cereus ATCC 14579 BC1569 -305 8.6 AAACTCGAACAAAA-(16)-ATTTGTACGTGTTT
Bacillus halodurans C-125 BH1514 -301 9.1 AAACACGAATAAAT-(16)-ATTCATTCGTTTTT
Bacillus clausii KSM-K16 ABC1443 -65 7.2 AAAGCCGAAAGATC-(16)-GGTCTTTCGGCTTT
Position: -111
Score: 8.2
Sequence: TATATCGAACGTTT-(17)-GAAAGTTCGTGTTT
Locus tag: GYMC61_2408
GYMC61_2408 -111 8.2 TATATCGAACGTTT-(17)-GAAAGTTCGTGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH1470
Ortholog function: Uncharacterized FAD-dependent dehydrogenase
Anoxybacillus flavithermus WK1 Aflv_1375 -105 8.1 TAACACGAACATTA-(16)-AAAAGATCGCTTTT
Geobacillus kaustophilus HTA426 GK1569 -39 8.4 TATATCGAACATTT-(17)-GAAAGTTCGTGTTT
Bacillus halodurans C-125 BH1470 -119 8.9 AAAAACGAACATTA-(17)-CAATATTCGATTAA
Position: -56
Score: 9.6
Sequence: AAAAACGAATATTA-(16)-TATTGTTCGCCTTT
Locus tag: GYMC61_3466
GYMC61_3466 -56 9.6 AAAAACGAATATTA-(16)-TATTGTTCGCCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pbuO
Ortholog function: Xanthine/uracil/thiamine/ascorbate permease family protein
Bacillus subtilis subsp. subtilis str. 168 BSU29990 -55 9.2 TAAAACGAATAATA-(17)-AAACGTTCGTAATT
Bacillus amyloliquefaciens FZB42 RBAM_027090 -55 9.2 TAAAACGAATAATA-(17)-AAATGTTCGTCATT
Bacillus pumilus SAFR-032 BPUM_2646 -55 9.1 TAAAACGAATATTA-(17)-TAATGTTCGTAAAT
Bacillus licheniformis DSM 13 BLi03152 -55 9.1 GATAACGAATAATA-(17)-TAATGTTCGTTATT
Position: -113
Score: 8.9
Sequence: ATAAGCGAATGAAA-(17)-AAATGTTCGTGTTT
Locus tag: GYMC61_3539
GYMC61_3539 -113 8.9 ATAAGCGAATGAAA-(17)-AAATGTTCGTGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: purA
Ortholog function: Adenylosuccinate synthetase (EC 6.3.4.4)
Bacillus subtilis subsp. subtilis str. 168 BSU40420 -128 8.2 GGAAGCGAACGAAT-(17)-TAATGTTCGGATTT
Bacillus amyloliquefaciens FZB42 RBAM_037450 -132 8.6 TAAGGCGAACAAAC-(17)-AAATGTTCGGATTT
Bacillus pumilus SAFR-032 BPUM_3693 -128 9.3 TAAAACGAACAAAA-(16)-TAATGTTCGGCTTT
Bacillus licheniformis DSM 13 BLi04341 -130 9.5 AATAACGAACAAAA-(17)-TAATGTTCGGATTT
Anoxybacillus flavithermus WK1 Aflv_2841 -81 8.9 GTATACGAATAAAA-(17)-AAATGTTCGGTTTT
-68 6.9 AATAACAAACAAAC-(16)-TTTTATTGATTTTT
Geobacillus kaustophilus HTA426 GK3475 -113 9.4 ATAAACGAATAAAA-(17)-TAATGTTCGTGTTT
Bacillus cereus ATCC 14579 BC5468 -122 8 TCTTACGAACGAAA-(16)-AAATGTTCGCTTTT
Bacillus halodurans C-125 BH4028 -134 8.7 TGAACCGAACAAAT-(17)-AAATGTTCGGATTT
Bacillus clausii KSM-K16 ABC4100 -111 8.1 TTATACGAATGTTG-(16)-AAATGTTCGTGTCT
Oceanobacillus iheyensis HTE831 OB3453 -240 8.2 TCTTCCGTACATTA-(16)-AAATGTTCGTATTT
-62 6.7 TAATACGAATATAA-(17)-GTATATAATTAATT
Paenibacillus sp. JDR-2 Pjdr2_6258 -187 9.6 ATATCCGAACAATT-(16)-AATTGTTCGTTTTT
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