Propagation of AraR regulog to Bacillus licheniformis DSM 13
| Source regulog: | AraR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi03256, BLi02061 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -192
Score: 5.8 Sequence: TTTTTTGTACGTACATATGT
Position: -160
Score: 5 Sequence: TAATATGTTCATATAAATAT
Locus tag: BLi02061
|
||||
| BLi02061 | -192 | 5.8 | TTTTTTGTACGTACATATGT | |
| -160 | 5 | TAATATGTTCATATAAATAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araR | ||||
| Ortholog function: Transcriptional repressor of arabinoside utilization, GntR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU33970 | -91 | 5.5 | TCAATTGTACGTACTTATAT |
| -48 | 6 | TAATTAGTACGTACAAATAT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_031330 | -167 | 5.6 | ACATTTGTACGTACTTATGA |
| -124 | 5.4 | AAATTAGTACGCACAAATAA | ||
| Bacillus pumilus SAFR-032 | BPUM_2330 | -191 | 6.1 | ATATTTGTACGTACATATGT |
| Bacillus licheniformis DSM 13 | BLi02061 | -192 | 5.8 | TTTTTTGTACGTACATATGT |
| -160 | 5 | TAATATGTTCATATAAATAT | ||
| Anoxybacillus flavithermus WK1 | Aflv_0528 | -81 | 5.9 | AAATATATACGTACAAATAA |
| Geobacillus kaustophilus HTA426 | GK1907 | -75 | 5 | ATAATGATACGGACAAATAA |
| Bacillus halodurans C-125 | BH1875 | -36 | 5.2 | TCATTTGTACGTATAAGTTG |
| Oceanobacillus iheyensis HTE831 | OB2800 | -203 | 5.4 | ATTATTGTACGTACATTTGT |
| -170 | 5.9 | ATATATATACGTACAAATTA | ||
| -63 | 5.3 | AAATATGTACATACAAGTAT | ||
| Paenibacillus sp. JDR-2 | Pjdr2_4208 | -100 | 4.8 | TCACATGTACATACAAGTTA |
|
Position: -138
Score: 5 Sequence: ATATTTATATGAACATATTA
Position: -106
Score: 5.8 Sequence: ACATATGTACGTACAAAAAA
Locus tag: BLi02062
|
||||
| BLi02062 | -138 | 5 | ATATTTATATGAACATATTA | |
| -106 | 5.8 | ACATATGTACGTACAAAAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araK | ||||
| Ortholog function: Ribulokinase (EC 2.7.1.16) | ||||
| Bacillus pumilus SAFR-032 | BPUM_2329 | -102 | 6.1 | ACATATGTACGTACAAATAT |
| Bacillus licheniformis DSM 13 | BLi02062 | -138 | 5 | ATATTTATATGAACATATTA |
| -106 | 5.8 | ACATATGTACGTACAAAAAA | ||
| Oceanobacillus iheyensis HTE831 | OB2799 | -152 | 5.9 | TAATTTGTACGTATATATAT |
| -119 | 5.4 | ACAAATGTACGTACAATAAT | ||
| Paenibacillus sp. JDR-2 | Pjdr2_4209 | -100 | 4.8 | TCACATGTACATACAAGTTA |
|
Position: -125
Score: 5.7 Sequence: TTAGTTGTACGTACATATAA
Locus tag: BLi03028
|
||||
| BLi03028 | -125 | 5.7 | TTAGTTGTACGTACATATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araA | ||||
| Ortholog function: L-arabinose isomerase (EC 5.3.1.4) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28800 | -103 | 5.9 | AAAATTGTTCGTACAAATAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_025860 | -99 | 5.8 | AAAATTGTTCGTACAAATAA |
| -57 | 5.3 | ATATTCGTACGTATATTTTT | ||
| Bacillus pumilus SAFR-032 | BPUM_2327 | -102 | 6.1 | ACATATGTACGTACAAATAT |
| Bacillus licheniformis DSM 13 | BLi02064 | -138 | 5 | ATATTTATATGAACATATTA |
| -106 | 5.8 | ACATATGTACGTACAAAAAA | ||
| Bacillus licheniformis DSM 13 | BLi03028 | -155 | 5.2 | GAAGTTGTTCGTACAAATAT |
| -125 | 5.7 | TTAGTTGTACGTACATATAA | ||
| Anoxybacillus flavithermus WK1 | Aflv_0531 | -54 | 5.7 | AAAAATGTACGTACAAAATT |
| Geobacillus kaustophilus HTA426 | GK1904 | -61 | 5.6 | AAAATTGTACGTACAATAGT |
| Bacillus halodurans C-125 | BH1873 | -71 | 5.7 | AAAATTGTACGTACAAGTGT |
| Oceanobacillus iheyensis HTE831 | OB2797 | -152 | 5.9 | TAATTTGTACGTATATATAT |
| -119 | 5.4 | ACAAATGTACGTACAATAAT | ||
| Paenibacillus sp. JDR-2 | Pjdr2_2502 | -83 | 5.6 | TAAGTTGTACGTACAACTTA |