Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AraR regulog to Bacillus licheniformis DSM 13

Reference regulog properties
Source regulog: AraR - Bacillales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus licheniformis DSM 13
Orthologous TF(s) BLi03256, BLi02061
Regulated genes 4
Built upon 43 sites [see more]
Predicted regulatory interactions in Bacillus licheniformis DSM 13
Locus tag Position Score Sequence
Position: -192
Score: 5.8
Sequence: TTTTTTGTACGTACATATGT
Position: -160
Score: 5
Sequence: TAATATGTTCATATAAATAT
Locus tag: BLi02061
BLi02061 -192 5.8 TTTTTTGTACGTACATATGT
-160 5 TAATATGTTCATATAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araR
Ortholog function: Transcriptional repressor of arabinoside utilization, GntR family
Bacillus subtilis subsp. subtilis str. 168 BSU33970 -91 5.5 TCAATTGTACGTACTTATAT
-48 6 TAATTAGTACGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_031330 -167 5.6 ACATTTGTACGTACTTATGA
-124 5.4 AAATTAGTACGCACAAATAA
Bacillus pumilus SAFR-032 BPUM_2330 -191 6.1 ATATTTGTACGTACATATGT
Bacillus licheniformis DSM 13 BLi02061 -192 5.8 TTTTTTGTACGTACATATGT
-160 5 TAATATGTTCATATAAATAT
Anoxybacillus flavithermus WK1 Aflv_0528 -81 5.9 AAATATATACGTACAAATAA
Geobacillus kaustophilus HTA426 GK1907 -75 5 ATAATGATACGGACAAATAA
Bacillus halodurans C-125 BH1875 -36 5.2 TCATTTGTACGTATAAGTTG
Oceanobacillus iheyensis HTE831 OB2800 -203 5.4 ATTATTGTACGTACATTTGT
-170 5.9 ATATATATACGTACAAATTA
-63 5.3 AAATATGTACATACAAGTAT
Paenibacillus sp. JDR-2 Pjdr2_4208 -100 4.8 TCACATGTACATACAAGTTA
Position: -138
Score: 5
Sequence: ATATTTATATGAACATATTA
Position: -106
Score: 5.8
Sequence: ACATATGTACGTACAAAAAA
Locus tag: BLi02062
BLi02062 -138 5 ATATTTATATGAACATATTA
-106 5.8 ACATATGTACGTACAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araK
Ortholog function: Ribulokinase (EC 2.7.1.16)
Bacillus pumilus SAFR-032 BPUM_2329 -102 6.1 ACATATGTACGTACAAATAT
Bacillus licheniformis DSM 13 BLi02062 -138 5 ATATTTATATGAACATATTA
-106 5.8 ACATATGTACGTACAAAAAA
Oceanobacillus iheyensis HTE831 OB2799 -152 5.9 TAATTTGTACGTATATATAT
-119 5.4 ACAAATGTACGTACAATAAT
Paenibacillus sp. JDR-2 Pjdr2_4209 -100 4.8 TCACATGTACATACAAGTTA
Position: -125
Score: 5.7
Sequence: TTAGTTGTACGTACATATAA
Locus tag: BLi03028
BLi03028 -125 5.7 TTAGTTGTACGTACATATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araA
Ortholog function: L-arabinose isomerase (EC 5.3.1.4)
Bacillus subtilis subsp. subtilis str. 168 BSU28800 -103 5.9 AAAATTGTTCGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_025860 -99 5.8 AAAATTGTTCGTACAAATAA
-57 5.3 ATATTCGTACGTATATTTTT
Bacillus pumilus SAFR-032 BPUM_2327 -102 6.1 ACATATGTACGTACAAATAT
Bacillus licheniformis DSM 13 BLi02064 -138 5 ATATTTATATGAACATATTA
-106 5.8 ACATATGTACGTACAAAAAA
Bacillus licheniformis DSM 13 BLi03028 -155 5.2 GAAGTTGTTCGTACAAATAT
-125 5.7 TTAGTTGTACGTACATATAA
Anoxybacillus flavithermus WK1 Aflv_0531 -54 5.7 AAAAATGTACGTACAAAATT
Geobacillus kaustophilus HTA426 GK1904 -61 5.6 AAAATTGTACGTACAATAGT
Bacillus halodurans C-125 BH1873 -71 5.7 AAAATTGTACGTACAAGTGT
Oceanobacillus iheyensis HTE831 OB2797 -152 5.9 TAATTTGTACGTATATATAT
-119 5.4 ACAAATGTACGTACAATAAT
Paenibacillus sp. JDR-2 Pjdr2_2502 -83 5.6 TAAGTTGTACGTACAACTTA
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