Propagation of RmgR regulog to Bacillus licheniformis DSM 13
| Source regulog: | RmgR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi03167 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -181
Score: 5.7 Sequence: TCATAT-(12)-ACTTTT
Position: -139
Score: 8.2 Sequence: TCATTT-(13)-TCATTT
Locus tag: BLi03166
|
||||
| BLi03166 | -181 | 5.7 | TCATAT-(12)-ACTTTT | |
| -139 | 8.2 | TCATTT-(13)-TCATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yteP | ||||
| Ortholog function: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1 | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU30135 | -154 | 7.7 | TCATTT-(13)-TCTTTT |
| Bacillus pumilus SAFR-032 | BPUM_2660 | -223 | 6.7 | CCATTT-(12)-TCTTTT |
| -155 | 8.2 | TCATTT-(13)-TCATTT | ||
| Bacillus licheniformis DSM 13 | BLi03166 | -139 | 8.2 | TCATTT-(13)-TCATTT |
| Bacillus halodurans C-125 | BH0484 | -155 | 7.7 | TCATTA-(13)-TCATTT |
| Bacillus clausii KSM-K16 | ABC1145 | -174 | 5.3 | TCATTT-(13)-gCAaaT |
| Oceanobacillus iheyensis HTE831 | OB2090 | -169 | 6.7 | TCAATT-(12)-TCATTA |
| Paenibacillus sp. JDR-2 | Pjdr2_1803 | -141 | 6.7 | TCAATT-(13)-TCATTA |
|
Position: -208
Score: 6.7 Sequence: TCATCT-(13)-TCTTTT
Locus tag: BLi03169
|
||||
| BLi03169 | -208 | 6.7 | TCATCT-(13)-TCTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytcP | ||||
| Ortholog function: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2 | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU30170 | -206 | 7.7 | TCATTT-(13)-TCTTTT |
| Bacillus licheniformis DSM 13 | BLi03169 | -208 | 6.7 | TCATCT-(13)-TCTTTT |
| Bacillus clausii KSM-K16 | ABC1146 | -174 | 5.3 | TCATTT-(13)-gCAaaT |
| Oceanobacillus iheyensis HTE831 | OB2089 | -169 | 6.7 | TCAATT-(12)-TCATTA |
| Paenibacillus sp. JDR-2 | Pjdr2_1804 | -141 | 6.7 | TCAATT-(13)-TCATTA |