Propagation of FadR regulog to Bacillus licheniformis DSM 13
| Source regulog: | FadR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi03002 |
| Regulated genes | 5 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -39
Score: 6.3 Sequence: ATGAATGGTCATTCATTCAT
Locus tag: BLi01103
|
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| BLi01103 | -39 | 6.3 | ATGAATGGTCATTCATTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lcfB | ||||
| Ortholog function: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU10270 | -35 | 6.5 | ATGAATGACTATTCATTCAC |
| Bacillus amyloliquefaciens FZB42 | RBAM_010470 | -44 | 6.9 | ATGAATGACTATTCATTCAT |
| Bacillus pumilus SAFR-032 | BPUM_0969 | -44 | 6.5 | ATGAATGGTTATTCATTCAT |
| Bacillus licheniformis DSM 13 | BLi01103 | -39 | 6.3 | ATGAATGGTCATTCATTCAT |
|
Position: -36
Score: 6.8 Sequence: TTGAATGAATACTCATTCAT
Locus tag: BLi01620
|
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| BLi01620 | -36 | 6.8 | TTGAATGAATACTCATTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ykuF | ||||
| Ortholog function: 2,4-dienoyl-CoA reductase, mitochondrial precursor (EC 1.3.1.34) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU14060 | -36 | 6.4 | TTGAATGAATAATCATTCAC |
| Bacillus amyloliquefaciens FZB42 | RBAM_013850 | -40 | 6.8 | ATGAATGATTATTCATTCAA |
| Bacillus pumilus SAFR-032 | BPUM_1303 | -40 | 6.7 | ATGAATGAATAGTCATTCAA |
| Bacillus licheniformis DSM 13 | BLi01620 | -36 | 6.8 | TTGAATGAATACTCATTCAT |
| Anoxybacillus flavithermus WK1 | Aflv_1909 | -37 | 6.5 | ATGAATGAATAACCATTCAT |
| Geobacillus kaustophilus HTA426 | GK1044 | -34 | 6.5 | ATGAATGAGTAATCAGTCAT |
| Bacillus cereus ATCC 14579 | BC3990 | -29 | 5.2 | ATGAATGTGTATTCATTTTT |
| Bacillus halodurans C-125 | BH2144 | -38 | 6.8 | TTGAATGAATATTCATTCAA |
|
Position: -43
Score: 6.9 Sequence: ATGAATGAGTATTCATTCAT
Locus tag: BLi03002
|
||||
| BLi03002 | -43 | 6.9 | ATGAATGAGTATTCATTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadR | ||||
| Ortholog function: Transcriptional regulator of fatty acids degradation, TetR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28550 | -44 | 6.9 | ATGAATGAATAGTCATTCAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_025610 | -38 | 6.9 | ATGAATGAATAGTCATTCAT |
| Bacillus pumilus SAFR-032 | BPUM_2512 | -41 | 6.8 | ATGAATGAATACTCATTCAA |
| Bacillus licheniformis DSM 13 | BLi03002 | -43 | 6.9 | ATGAATGAGTATTCATTCAT |
| Anoxybacillus flavithermus WK1 | Aflv_0565 | -44 | 6.9 | ATGAATGATTATTCATTCAT |
| Geobacillus kaustophilus HTA426 | GK2689 | -60 | 6.1 | ATGAATGATGGTTCATTCAT |
| Bacillus cereus ATCC 14579 | BC4525 | -45 | 6.6 | ATGAATGACTATTCATTCAG |
| Bacillus halodurans C-125 | BH3102 | -38 | 6.9 | ATGAATGAATACTCATTCAT |
| Bacillus clausii KSM-K16 | ABC2672 | -45 | 6.8 | ATGAATGAACATTCATTCAT |
| Oceanobacillus iheyensis HTE831 | OB2121 | -50 | 5.9 | ATGAATGATCATTCACTCAG |
|
Position: -39
Score: 6.8 Sequence: ATGAATGAGTATTCATTCAA
Locus tag: BLi03466
|
||||
| BLi03466 | -39 | 6.8 | ATGAATGAGTATTCATTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadN | ||||
| Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32840 | 39 | 6.7 | ATGAATGACTATTCATTCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_029920 | -39 | 6.7 | ATGAATGACTATTCATTCAA |
| Bacillus pumilus SAFR-032 | BPUM_2942 | -39 | 6.5 | ATGAATGACTGTTCATTCAA |
| Bacillus licheniformis DSM 13 | BLi03466 | -39 | 6.8 | ATGAATGAGTATTCATTCAA |
| Geobacillus kaustophilus HTA426 | GK3008 | -40 | 6.5 | ATGAATGACCATTCATTCAA |
| Bacillus cereus ATCC 14579 | BC5004 | -38 | 6.5 | TTGAATGAGCATTCATTCAA |
| Bacillus halodurans C-125 | BH3488 | -36 | 6.5 | ATGAATGAGTATTCATTCGT |
| Bacillus clausii KSM-K16 | ABC2990 | -46 | 5.9 | ATGAATGAGTGTTCATTCGG |
| Oceanobacillus iheyensis HTE831 | OB2395 | -41 | 6.6 | ATGAATGAGCATTCATTCAA |
|
Position: -82
Score: 6.3 Sequence: TTGACTGAACACTCATTCAT
Locus tag: BLi03969
|
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| BLi03969 | -82 | 6.3 | TTGACTGAACACTCATTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadF | ||||
| Ortholog function: Fe-S oxidoreductase | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU37180 | -98 | 6.3 | TTGACTGAACACTCATTCAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_034330 | -82 | 6.3 | TTGACTGAACACTCATTCAT |
| Bacillus pumilus SAFR-032 | BPUM_3374 | -88 | 6.6 | TTGACTGAATACTCATTCAT |
| Bacillus licheniformis DSM 13 | BLi03969 | -82 | 6.3 | TTGACTGAACACTCATTCAT |
| Anoxybacillus flavithermus WK1 | Aflv_2740 | -85 | 6.3 | TTGACTGAATGCTCATTCAT |
| Geobacillus kaustophilus HTA426 | GK3398 | -106 | 6.3 | TTGACTGAATGCTCATTCAT |
| Bacillus cereus ATCC 14579 | BC5345 | -115 | 5.9 | TTGACTGAATGCTCACTCAT |
| Bacillus halodurans C-125 | BH3802 | -123 | 6.5 | ATGAGTGAATACTCATTCAT |
| Bacillus clausii KSM-K16 | ABC3892 | -109 | 6.2 | CTGACTGAATGCTCATTCAT |
| Oceanobacillus iheyensis HTE831 | OB3014 | -106 | 6.3 | TTGACTGAATGATCATTCAT |