Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YodB/CatR regulog to Bacillus cereus NVH0597-99

Reference regulog properties
Source regulog: YodB/CatR - Bacillales
Regulator type: Transcription factor
Regulator family: HxlR
Regulation mode: repressor
Biological process: Oxidative stress response
Effector: Diamide; Quinone
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus cereus NVH0597-99
Orthologous TF(s) BcerN_010100012496
Regulated genes 5
Built upon 42 sites [see more]
Predicted regulatory interactions in Bacillus cereus NVH0597-99
Locus tag Position Score Sequence
Position: -164
Score: 4.7
Sequence: AGTTACTTATTAAAAGT
Position: -160
Score: 4.7
Sequence: ACTTATTAAAAGTAATT
Locus tag: BcerN_010100000180
BcerN_010100000180 -164 4.7 AGTTACTTATTAAAAGT
-160 4.7 ACTTATTAAAAGTAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: spxA
Ortholog function: RNA polymerase-binding transcriptional regulator of oxidative stress response
Bacillus amyloliquefaciens FZB42 RBAM_011500 -105 4.6 ACTTACTTTTTTATAGT
Bacillus cereus ATCC 14579 BC1188 -165 4.7 AGTTACTTATTAAAAGT
Bacillus licheniformis DSM 13 BLi01238 -104 4.6 ACTTACTTTTTTATAGT
Bacillus pumilus SAFR-032 BPUM_1077 -106 4.6 ACTTACTTTTTTATAGT
Bacillus subtilis subsp. subtilis str. 168 BSU11500 -106 4.6 ACTTACTTTTTTATAGT
Position: -203
Score: 5.6
Sequence: ACTTACATAAAGTAACT
Locus tag: BcerN_010100005115
BcerN_010100005115 -203 5.6 ACTTACATAAAGTAACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ribB
Ortholog function: GTP cyclohydrolase II( EC 3.5.4.25 )
Bacillus cereus ATCC 14579 BC3388 -202 5.1 ACTTACATAAGGTAACT
-82 4.7 ACTTACGTTGTGTAAGT
Position: -72
Score: 5.7
Sequence: ACTTACAAAATGTAAGT
Locus tag: BcerN_010100008452
BcerN_010100008452 -72 5.7 ACTTACAAAATGTAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yodC
Ortholog function: Putative NAD(P)H nitroreductase
Anoxybacillus flavithermus WK1 Aflv_1959 -68 4.6 ACAAACTTATTGTAACT
-31 5 ACTAATAAAAAGTAAGT
Bacillus amyloliquefaciens FZB42 RBAM_019310 -63 5.3 AGTTACATTTAGTAAGC
Bacillus cereus ATCC 14579 BC4045 -69 5.7 ACTTACAAAATGTAAGT
Bacillus halodurans C-125 BH2236 -63 4.4 ACTTTACTTTTGTAAGT
Bacillus licheniformis DSM 13 BLi02275 -73 5.5 AGTTACAAAAAGTAAGT
Bacillus pumilus SAFR-032 BPUM_1876 -75 5.5 AGTTACAATAAGTAAGT
Bacillus subtilis subsp. subtilis str. 168 BSU19550 -66 5.3 AGTTACATTTAGTAAGC
Position: -49
Score: 4.1
Sequence: ACTTACTTTTTACAAGA
Locus tag: BcerN_010100012496
BcerN_010100012496 -49 4.1 ACTTACTTTTTACAAGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yodB
Ortholog function: Transcriptional regulator of oxidative stress, HxlR family
Anoxybacillus flavithermus WK1 Aflv_1958 -78 5 ACTTACTTTTTATTAGT
-41 4.6 AGTTACAATAAGTTTGT
Bacillus amyloliquefaciens FZB42 RBAM_019300 -80 5.3 GCTTACTAAATGTAACT
Bacillus cereus ATCC 14579 BC5197 -49 4.1 ACTTACTTTTTACAAGA
Bacillus licheniformis DSM 13 BLi02274 -90 5.5 ACTTACTTTTTGTAACT
Bacillus pumilus SAFR-032 BPUM_1875 -81 5.5 ACTTACTTATTGTAACT
Bacillus subtilis subsp. subtilis str. 168 BSU19540 -80 5.3 GCTTACTAAATGTAACT
Paenibacillus sp. JDR-2 Pjdr2_4807 -134 4.2 ACTTACTTTAGTCAAGT
Position: -79
Score: 5.2
Sequence: ACTTACATAAGGTAAGT
Locus tag: BcerN_010100028335
BcerN_010100028335 -79 5.2 ACTTACATAAGGTAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: azoR2
Ortholog function: FMN-dependent NADH-azoreductase
Bacillus cereus ATCC 14579 BC2194 -78 5.2 ACTTACATAAGGTAAGT
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