Propagation of Fnr regulog to Bacillus licheniformis DSM 13
| Source regulog: | Fnr - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Anaerobic metabolism |
| Effector: | Oxygen |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi02080 |
| Regulated genes | 6 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -80
Score: 5.4 Sequence: TGTGAAGTATTGCACA
Position: -57
Score: 5.4 Sequence: TGTGAAGAATTTCACA
Locus tag: BLi00366
|
||||
| BLi00366 | -80 | 5.4 | TGTGAAGTATTGCACA | |
| -57 | 5.4 | TGTGAAGAATTTCACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ldh | ||||
| Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03050 | -83 | 4.7 | TGTGAAGTGTTGCACA |
| -60 | 6 | TGTGAAATACTTCACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_003290 | -80 | 5.4 | TGTGAAGTATTGCACA |
| -57 | 6 | TGTGAAATACTTCACA | ||
| Bacillus pumilus SAFR-032 | BPUM_0277 | -77 | 5.4 | TGTGAAGTATTGCACA |
| -54 | 6 | TGTGAAATACTTCACA | ||
| Bacillus licheniformis DSM 13 | BLi00366 | -80 | 5.4 | TGTGAAGTATTGCACA |
| -57 | 5.4 | TGTGAAGAATTTCACA | ||
| Geobacillus kaustophilus HTA426 | GK0475 | -40 | 4.9 | TGTGAATATATTCACA |
| Bacillus halodurans C-125 | BH3937 | -274 | 6 | TGTGAAATATTTCACA |
| -217 | 6 | TGTGAAATATTTCACA | ||
| -42 | 4.8 | TGTGAAAATATTCACA | ||
| Bacillus clausii KSM-K16 | ABC2872 | -66 | 5.4 | TGTGAAATAATGCACA |
| -43 | 5.4 | TGTGAATAATTTCACA | ||
| Oceanobacillus iheyensis HTE831 | OB3279 | -66 | 6 | TGTGAAATATTTCACA |
|
Position: -73
Score: 5.7 Sequence: TGTGAATTAAATCACT
Locus tag: BLi02078
|
||||
| BLi02078 | -73 | 5.7 | TGTGAATTAAATCACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: arfM | ||||
| Ortholog function: Anaerobic respiration and fermentation modulator | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU37290 | -73 | 5.6 | TGTGAAATACATCACT |
| Bacillus licheniformis DSM 13 | BLi02078 | -73 | 5.7 | TGTGAATTAAATCACT |
| Bacillus halodurans C-125 | BH0229 | -74 | 4.8 | TGTGAACCATGTCACT |
|
Position: -92
Score: 5.7 Sequence: AGTGATTTAATTCACA
Locus tag: BLi02079
|
||||
| BLi02079 | -92 | 5.7 | AGTGATTTAATTCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywiC | ||||
| Ortholog function: Putative integral inner membrane protein | ||||
| Bacillus licheniformis DSM 13 | BLi02079 | -92 | 5.7 | AGTGATTTAATTCACA |
|
Position: -95
Score: 6 Sequence: TGTGACGTAATTCACA
Locus tag: BLi02081
|
||||
| BLi02081 | -95 | 6 | TGTGACGTAATTCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: narK | ||||
| Ortholog function: Nitrate/nitrite transporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU37320 | -80 | 6 | TGTGATGTAATTCACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_034470 | -79 | 6 | TGTGATGTAATTCACA |
| Bacillus licheniformis DSM 13 | BLi02081 | -95 | 6 | TGTGACGTAATTCACA |
| Geobacillus kaustophilus HTA426 | GK0766 | -68 | 4.7 | TGTGATCAACCTCACA |
|
Position: -87
Score: 5.3 Sequence: TGTGAAATGTTTCACA
Locus tag: BLi04135
|
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| BLi04135 | -87 | 5.3 | TGTGAAATGTTTCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywcJ | ||||
| Ortholog function: Formate/nitrite family of transporters | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU38060 | -64 | 6 | TGTGAAATACTTCACA |
| Bacillus licheniformis DSM 13 | BLi04135 | -87 | 5.3 | TGTGAAATGTTTCACA |
| Anoxybacillus flavithermus WK1 | Aflv_1436 | -41 | 5.3 | TGTGAAAAACATCACA |
|
Position: -90
Score: 5.3 Sequence: TGTGAAATGTTTCACA
Locus tag: BLi04290
|
||||
| BLi04290 | -90 | 5.3 | TGTGAAATGTTTCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adh | ||||
| Ortholog function: NAD-dependent aldehyde dehydrogenase domain and Fe-dependent alcohol dehydrogense domain | ||||
| Bacillus licheniformis DSM 13 | BLi04290 | -90 | 5.3 | TGTGAAATGTTTCACA |