Propagation of LexA regulog to Bacillus licheniformis DSM 13
| Source regulog: | LexA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi02032 |
| Regulated genes | 16 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -149
Score: 5.3 Sequence: ACGAACATTTGTTCTT
Locus tag: BLi00181
|
||||
| BLi00181 | -149 | 5.3 | ACGAACATTTGTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pbpX | ||||
| Ortholog function: penicillin-binding endopeptidase X | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU16950 | -87 | 4.7 | CCGAATATGCGTTCGC |
| Bacillus licheniformis DSM 13 | BLi00181 | -149 | 5.3 | ACGAACATTTGTTCTT |
|
Position: -41
Score: 5.4 Sequence: AAGAACAAATGTTCGT
Locus tag: BLi00182
|
||||
| BLi00182 | -41 | 5.4 | AAGAACAAATGTTCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH1502 | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus licheniformis DSM 13 | BLi00182 | -41 | 5.4 | AAGAACAAATGTTCGT |
| Bacillus halodurans C-125 | BH1502 | -71 | 4.8 | ACGAACGTACGTTCTT |
| -51 | 4.8 | TCGAATGTACGTTCGT | ||
|
Position: -33
Score: 5.2 Sequence: TAGAACATATGTTTGA
Locus tag: BLi00715
|
||||
| BLi00715 | -33 | 5.2 | TAGAACATATGTTTGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pcrA | ||||
| Ortholog function: ATP-dependent DNA helicase | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU06610 | -36 | 4.4 | TAGAACGTATGTTTTG |
| Bacillus amyloliquefaciens FZB42 | RBAM_007010 | -32 | 5.2 | TAGAACATATGTTTGA |
| Bacillus pumilus SAFR-032 | BPUM_0625 | -32 | 5.2 | TAGAACATAAGTTCGA |
| Bacillus licheniformis DSM 13 | BLi00715 | -33 | 5.2 | TAGAACATATGTTTGA |
| Anoxybacillus flavithermus WK1 | Aflv_0246 | -13 | 4.5 | GAGAACATATGTTTTG |
| Geobacillus kaustophilus HTA426 | GK0275 | -31 | 4.8 | TAGAACATATGTTTTG |
| Bacillus halodurans C-125 | BH0648 | -8 | 4.6 | AAGAACAAGTGTTTGG |
|
Position: -45
Score: 4.6 Sequence: CAGAACAAATGTTCCT
Locus tag: BLi01120
|
||||
| BLi01120 | -45 | 4.6 | CAGAACAAATGTTCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhjD | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus pumilus SAFR-032 | BPUM_0989 | -34 | 4.5 | AAGAACGTGTGTTCTA |
| Bacillus licheniformis DSM 13 | BLi01120 | -45 | 4.6 | CAGAACAAATGTTCCT |
| Bacillus halodurans C-125 | BH2963 | -40 | 4.5 | ACGAACACATGTTCCT |
| Oceanobacillus iheyensis HTE831 | OB1178 | -34 | 4.5 | ACGAACATATGATCTG |
|
Position: -179
Score: 4.5 Sequence: AGGAACATTTGTTCTG
Locus tag: BLi01121
|
||||
| BLi01121 | -179 | 4.5 | AGGAACATTTGTTCTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhjE | ||||
| Ortholog function: Alkaline phosphatase like protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_010700 | -128 | 4.4 | GAGAACCTTTGTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_0990 | -128 | 4.6 | TAGAACACACGTTCTT |
| Bacillus licheniformis DSM 13 | BLi01121 | -179 | 4.5 | AGGAACATTTGTTCTG |
| Anoxybacillus flavithermus WK1 | Aflv_2232 | -174 | 4.3 | GCGAACAAATGATCGA |
| 34 | 4.3 | TAAAACATATGCTTGA | ||
| Oceanobacillus iheyensis HTE831 | OB1179 | -166 | 4.7 | CAGATCATATGTTCGT |
|
Position: -30
Score: 4.9 Sequence: CAGAACATTCGTTCGA
Locus tag: BLi01317
|
||||
| BLi01317 | -30 | 4.9 | CAGAACATTCGTTCGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xkdA | ||||
| Ortholog function: Phage-like element PBSX protein xkdA | ||||
| Bacillus pumilus SAFR-032 | BPUM_1157 | -30 | 5.2 | TAGAACATACGTTTGT |
| Bacillus licheniformis DSM 13 | BLi01317 | -30 | 4.9 | CAGAACATTCGTTCGA |
| Oceanobacillus iheyensis HTE831 | OB0206 | -435 | 4 | TCAAATCAATGTTAGT |
| -31 | 4.8 | CAGAACATACGTTCTC | ||
|
Position: -86
Score: 4.8 Sequence: TCGAATATGCGTTCGC
Locus tag: BLi01918
|
||||
| BLi01918 | -86 | 4.8 | TCGAATATGCGTTCGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: recA | ||||
| Ortholog function: Recombination protein A | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU16940 | -87 | 4.7 | CCGAATATGCGTTCGC |
| Bacillus amyloliquefaciens FZB42 | RBAM_016780 | -86 | 4.7 | CCGAATATGCGTTCGC |
| Bacillus pumilus SAFR-032 | BPUM_1598 | -88 | 5.2 | TCGAATATGTGTTCGT |
| Bacillus licheniformis DSM 13 | BLi01918 | -259 | 4.3 | TCGAATTTCAGTTCGC |
| -86 | 4.8 | TCGAATATGCGTTCGC | ||
| Anoxybacillus flavithermus WK1 | Aflv_1530 | 34 | 4.7 | ACGAACATCTATTCGT |
| Geobacillus kaustophilus HTA426 | GK1295 | -85 | 4.4 | ACGAATGGACGTTCGT |
| Bacillus cereus ATCC 14579 | BC3779 | -85 | 5.1 | TCGAATAAATGTTCGA |
| Bacillus halodurans C-125 | BH2383 | -343 | 4 | AAAAATTCACGTTTGT |
| -121 | 4.9 | GCGAATAAATGTTCGT | ||
| Bacillus clausii KSM-K16 | ABC2199 | -132 | 5.3 | ACGAATAAATGTTCGT |
| Oceanobacillus iheyensis HTE831 | OB1624 | -82 | 4.4 | AAGAACATCCATTCGT |
| Paenibacillus sp. JDR-2 | Pjdr2_3379 | -297 | 3.9 | GCGAACAATAATTTGT |
| -84 | 4.9 | ACGAATGTATGTTCGA | ||
|
Position: -73
Score: 5.1 Sequence: TCGAACCTATGTTTGT
Locus tag: BLi02032
|
||||
| BLi02032 | -73 | 5.1 | TCGAACCTATGTTTGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lexA | ||||
| Ortholog function: SOS-response transcriptional repressor | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17850 | -139 | 4.2 | AGGAATGTTTGTTCGC |
| -102 | 4.4 | ACGAACAAACGTTTCT | ||
| -73 | 5.1 | TCGAACCTATGTTTGT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_017650 | -140 | 4.5 | AAGAATGTTTGTTCGC |
| -103 | 4.4 | ACGAACAAACGTTTCT | ||
| -73 | 5.1 | TCGAACCTATGTTTGT | ||
| Bacillus pumilus SAFR-032 | BPUM_1686 | -142 | 4.6 | TAGAATGTGTGTTCGT |
| -103 | 4.4 | ACGAACAAACGTTTCT | ||
| -73 | 5.1 | TCGAACCTATGTTTGT | ||
| Bacillus licheniformis DSM 13 | BLi02032 | -346 | 4.1 | ATGAATTTGTGTTTGT |
| -141 | 4.2 | CAGAATGTTTGTTCGG | ||
| -103 | 4.6 | ACGAACAAATGTTTCT | ||
| -73 | 5.1 | TCGAACCTATGTTTGT | ||
| Anoxybacillus flavithermus WK1 | Aflv_1506 | -110 | 5.2 | TAGAACATTTGTTTGT |
| -82 | 4.8 | GAGAACTTTTGTTCGT | ||
| -53 | 5.2 | TCGAACTTATGTTTGT | ||
| Geobacillus kaustophilus HTA426 | GK1328 | -136 | 4.5 | TAGAATGTTTGTTCGC |
| -103 | 4.9 | AGGAACATTTGTTTGT | ||
| -74 | 5.1 | TCGAACCTATGTTTGT | ||
| Bacillus cereus ATCC 14579 | BC3690 | -70 | 5.2 | TCGAACTTATGTTTGT |
| Bacillus halodurans C-125 | BH2356 | -107 | 4.7 | AAGAACACTTGTTTGT |
| -78 | 4.9 | TAGAACTTATGTTTGC | ||
| Bacillus clausii KSM-K16 | ABC2167 | -107 | 4.6 | AGGAACAACTGTTCGT |
| -76 | 4.9 | TAGAACTTATGTTTGC | ||
| Oceanobacillus iheyensis HTE831 | OB1669 | -142 | 4.8 | CAGAACAATTGTTCTT |
| -107 | 4.6 | CCGAACATATGATCTT | ||
| -78 | 4.2 | TAGAACGAGTGTTTGC | ||
| Paenibacillus sp. JDR-2 | Pjdr2_2621 | -157 | 4.4 | CCGAACGTTTGTTCTG |
| -118 | 5.1 | ACGAACAAATGTTTGC | ||
| -72 | 5.1 | AAGAACTTATGTTTGT | ||
|
Position: -280
Score: 4.8 Sequence: AGGAATATTTGTTCGT
Locus tag: BLi02414
|
||||
| BLi02414 | -280 | 4.8 | AGGAATATTTGTTCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hupA | ||||
| Ortholog function: DNA-binding protein HU 1 | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU22790 | -281 | 4.3 | AGGAATATTCGTTCGG |
| Bacillus amyloliquefaciens FZB42 | RBAM_020950 | -282 | 4.5 | AGGAATATTTGTTCGG |
| Bacillus pumilus SAFR-032 | BPUM_2010 | -277 | 4.4 | AGGAATATTCGTTCGC |
| -241 | 3.9 | ACGAATAAGGATTCTT | ||
| Bacillus licheniformis DSM 13 | BLi02414 | -280 | 4.8 | AGGAATATTTGTTCGT |
|
Position: -251
Score: 3.9 Sequence: CAGAACAAACGGTTTT
Position: -177
Score: 4 Sequence: CAGAATGTACATTCGT
Position: -75
Score: 4 Sequence: TCGAACATGTTTTATT
Locus tag: BLi02476
|
||||
| BLi02476 | -251 | 3.9 | CAGAACAAACGGTTTT | |
| -177 | 4 | CAGAATGTACATTCGT | ||
| -75 | 4 | TCGAACATGTTTTATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ypuD | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU23300 | -171 | 4.7 | CAGAACATAAATTCGT |
| Bacillus amyloliquefaciens FZB42 | RBAM_021430 | -177 | 4.7 | CAGAACATAAATTCGT |
| Bacillus pumilus SAFR-032 | BPUM_2062 | -169 | 4 | AAGAACGCATATTCGT |
| Bacillus licheniformis DSM 13 | BLi02476 | -177 | 4 | CAGAATGTACATTCGT |
|
Position: -145
Score: 4.2 Sequence: CAGAACGATTGTTCTC
Locus tag: BLi02762
|
||||
| BLi02762 | -145 | 4.2 | CAGAACGATTGTTCTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sda | ||||
| Ortholog function: Sporulation inhibitor sda | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU25690 | -127 | 4.4 | CAGAACGATTGTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_023990 | -144 | 4.4 | CAGAACGATTGTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2304 | -145 | 4.4 | CAGAACGATTGTTCTT |
| Bacillus licheniformis DSM 13 | BLi02762 | -145 | 4.2 | CAGAACGATTGTTCTC |
| Anoxybacillus flavithermus WK1 | Aflv_0810 | -181 | 4 | AAAAACCGACGTTTTT |
| -57 | 4.4 | CAGAACGATTGTTCTT | ||
| Geobacillus kaustophilus HTA426 | GK2527 | -105 | 3.9 | CAGAACGGTTGTTCTC |
|
Position: -74
Score: 4.5 Sequence: AAGAACATTTGTTTCT
Locus tag: BLi03072
|
||||
| BLi03072 | -74 | 4.5 | AAGAACATTTGTTTCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dnaE | ||||
| Ortholog function: DNA polymerase III alpha subunit (EC 2.7.7.7) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29230 | -76 | 4.5 | AAGAACATTTGTTTCT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026280 | -69 | 4.5 | AAGAACATTTGTTTCT |
| Bacillus pumilus SAFR-032 | BPUM_2566 | -73 | 4.5 | AAGAACATTTGTTTCT |
| Bacillus licheniformis DSM 13 | BLi03072 | -74 | 4.5 | AAGAACATTTGTTTCT |
| Oceanobacillus iheyensis HTE831 | OB2177 | -161 | 4.1 | GCGAAAAAACGTTCTT |
| -63 | 4.1 | CCGTATACATGTTCGT | ||
|
Position: -81
Score: 4.7 Sequence: AGAAACAAATGTTCTT
Locus tag: BLi03073
|
||||
| BLi03073 | -81 | 4.7 | AGAAACAAATGTTCTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytrH | ||||
| Ortholog function: Sporulation membrane protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29239 | -79 | 4.7 | AGAAACAAATGTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_026290 | -80 | 4.7 | AGAAACAAATGTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2567 | -80 | 4.7 | AGAAACAAATGTTCTT |
| Bacillus licheniformis DSM 13 | BLi03073 | -81 | 4.7 | AGAAACAAATGTTCTT |
|
Position: -81
Score: 4.9 Sequence: CCGAACTTTAGTTCGT
Locus tag: BLi03759
|
||||
| BLi03759 | -81 | 4.9 | CCGAACTTTAGTTCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uvrB | ||||
| Ortholog function: Excinuclease ABC subunit B | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU35170 | -93 | 4.9 | CCGAACTTTAGTTCGT |
| Bacillus amyloliquefaciens FZB42 | RBAM_032310 | -90 | 5 | TCGAACTTTAGTTCGT |
| Bacillus pumilus SAFR-032 | BPUM_3148 | -82 | 4.9 | CCGAACTTTAGTTCGT |
| Bacillus licheniformis DSM 13 | BLi03759 | -81 | 4.9 | CCGAACTTTAGTTCGT |
| Anoxybacillus flavithermus WK1 | Aflv_2547 | -81 | 5.1 | TAGAATATTTGTTCGT |
| Geobacillus kaustophilus HTA426 | GK3086 | -85 | 4.8 | ACGAATATGAGTTCGC |
| Bacillus cereus ATCC 14579 | BC5168 | -86 | 4.9 | CCGAATATCTGTTCGT |
| Bacillus halodurans C-125 | BH3595 | -91 | 4.9 | CAAAACAAACGTTCGT |
| Bacillus clausii KSM-K16 | ABC3059 | -337 | 4.4 | TAGTACGTATGTTCGT |
| Oceanobacillus iheyensis HTE831 | OB2488 | -70 | 4.7 | ACGAATACTTGTTCGT |