Propagation of XylR regulog to Bacillus licheniformis DSM 13
| Source regulog: | XylR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi04049 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -202
Score: 6.3 Sequence: ACTTAGTTTATTGAACAAATAAACT
Locus tag: BLi01880
|
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| BLi01880 | -202 | 6.3 | ACTTAGTTTATTGAACAAATAAACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gunA | ||||
| Ortholog function: Endoglucanase 4 precursor (EC 3.2.1.4) | ||||
| Bacillus licheniformis DSM 13 | BLi01880 | -202 | 6.3 | ACTTAGTTTATTGAACAAATAAACT |
|
Position: -52
Score: 6 Sequence: ACTTAGTTTAGCTATTAAACTAACA
Locus tag: BLi03540
|
||||
| BLi03540 | -52 | 6 | ACTTAGTTTAGCTATTAAACTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BLi03540 | ||||
| Ortholog function: Possible alpha-xyloside ABC transporter, substrate-binding component | ||||
| Bacillus licheniformis DSM 13 | BLi03540 | -52 | 6 | ACTTAGTTTAGCTATTAAACTAACA |
|
Position: -69
Score: 6.4 Sequence: AGTTAGTTTAATGGTTAAACAAACA
Locus tag: BLi04048
|
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| BLi04048 | -69 | 6.4 | AGTTAGTTTAATGGTTAAACAAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17600 | -100 | 6.6 | AGTTAGTTTGTTTAAACAACAAACT |
| Bacillus amyloliquefaciens FZB42 | RBAM_017350 | -101 | 6.1 | AGTTAGTTTGTTTGGGCAACAAACT |
| Bacillus pumilus SAFR-032 | BPUM_1829 | -47 | 5.9 | AGTTTGTTGAATCAACTTACAAAGT |
| Bacillus licheniformis DSM 13 | BLi04048 | -69 | 6.4 | AGTTAGTTTAATGGTTAAACAAACA |
| Geobacillus kaustophilus HTA426 | GK1875 | -87 | 6.3 | ACTTTGTTTATATGATAGACAAACA |
| Bacillus halodurans C-125 | BH2757 | -102 | 6.7 | AGTTTGTCTATTGAATAAACTAAGT |
| Bacillus clausii KSM-K16 | ABC0572 | -45 | 6.3 | ACTTAGTTTAAATAATAAACAAACC |
| Oceanobacillus iheyensis HTE831 | OB3119 | -44 | 6.7 | ACTTTGTTTGTTAGATAAACAAACA |
| Paenibacillus sp. JDR-2 | Pjdr2_5159 | -123 | 6.7 | AGTTTGTTTAATAGACAAACTAAGT |
|
Position: -147
Score: 6.4 Sequence: TGTTTGTTTAACCATTAAACTAACT
Locus tag: BLi04049
|
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| BLi04049 | -147 | 6.4 | TGTTTGTTTAACCATTAAACTAACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylR | ||||
| Ortholog function: Transcriptional repressor of the xylose metabolism, ROK family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17590 | -268 | 6.6 | AGTTTGTTGTTTAAACAAACTAACT |
| Bacillus amyloliquefaciens FZB42 | RBAM_017340 | -187 | 6.1 | AGTTTGTTGCCCAAACAAACTAACT |
| Bacillus pumilus SAFR-032 | BPUM_1830 | -191 | 5.9 | ACTTTGTAAGTTGATTCAACAAACT |
| Bacillus licheniformis DSM 13 | BLi04049 | -147 | 6.4 | TGTTTGTTTAACCATTAAACTAACT |
| Geobacillus kaustophilus HTA426 | GK2422 | -230 | 6 | AATTAGTTTATTATATAAACTAAGA |
| Bacillus halodurans C-125 | BH2758 | -151 | 6.7 | ACTTAGTTTATTCAATAGACAAACT |
| Oceanobacillus iheyensis HTE831 | OB3124 | -87 | 5.8 | TGTTTGTCTACCGGTTAAACAAAGT |
| Paenibacillus sp. JDR-2 | Pjdr2_5182 | -113 | 6.7 | AGTTTGTCTATTAAACAAACTAAGT |