Propagation of SinR regulog to Bacillus licheniformis DSM 13
| Source regulog: | SinR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | XRE |
| Regulation mode: | repressor |
| Biological process: | Biofilm formation |
| Effector: | SinI, antirepressor protein |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus licheniformis DSM 13 |
| Orthologous TF(s) | BLi02636 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -55
Score: 5.9 Sequence: GTTCTTTAAAACGAAC
Locus tag: BLi02639
|
||||
| BLi02639 | -55 | 5.9 | GTTCTTTAAAACGAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqxM | ||||
| Ortholog function: Lipoprotein for biofilm formation | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_022960 | -55 | 6.1 | GTTCTTTAAAGAGAAC |
| Bacillus halodurans C-125 | BH2131 | -131 | 5.7 | GTTCTTTATAAAAAAC |
| Bacillus licheniformis DSM 13 | BLi02639 | -55 | 5.9 | GTTCTTTAAAACGAAC |
| Bacillus pumilus SAFR-032 | BPUM_2196 | -41 | 6.3 | GTTCTTTTTAAAGAAC |
| Bacillus subtilis subsp. subtilis str. 168 | BSU24640 | -57 | 6.1 | GTTCTTTAAAGAGAAC |
|
Position: -106
Score: 6.1 Sequence: GTTCTCTAAAAAGAAC
Locus tag: BLi03694
|
||||
| BLi03694 | -106 | 6.1 | GTTCTCTAAAAAGAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: epsA | ||||
| Ortholog function: Possible capsular polysaccharide biosynthesis protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_031670 | -125 | 6.3 | GTTCTTTAAAAAGAAC |
| Bacillus licheniformis DSM 13 | BLi03694 | -106 | 6.1 | GTTCTCTAAAAAGAAC |
| Bacillus pumilus SAFR-032 | BPUM_3083 | -125 | 6.3 | GTTCTTTAAAAAGAAC |
| Bacillus subtilis subsp. subtilis str. 168 | BSU34370 | -127 | 6 | GTTCTCTAAAGAGAAC |
|
Position: -145
Score: 6.1 Sequence: GTTCTTTTTAGAGAAC
Locus tag: BLi03695
|
||||
| BLi03695 | -145 | 6.1 | GTTCTTTTTAGAGAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: slr | ||||
| Ortholog function: Transcriptional repressor of cell separation and motility/antirepressor of SinR | ||||
| Bacillus licheniformis DSM 13 | BLi03695 | -145 | 6.1 | GTTCTTTTTAGAGAAC |