Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PadR regulog to Bacillus licheniformis DSM 13

Reference regulog properties
Source regulog: PadR - Bacillales
Regulator type: Transcription factor
Regulator family: PadR
Regulation mode: repressor
Biological process: Phenolic acid stress response
Effector: p-Coumaric acid; Ferulic acid
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus licheniformis DSM 13
Orthologous TF(s) BLi03079
Regulated genes 1
Built upon 5 sites [see more]
Predicted regulatory interactions in Bacillus licheniformis DSM 13
Locus tag Position Score Sequence
Position: -58
Score: 6.6
Sequence: ATATATGTAAATATCAACATGTTT
Locus tag: BLi03407
BLi03407 -58 6.6 ATATATGTAAATATCAACATGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: padC
Ortholog function: Phenolic acid decarboxylase (EC 4.1.1.-)
Bacillus amyloliquefaciens FZB42 RBAM_031730 -95 7.1 AAACGTGTAAATAGTTACATGTTT
Bacillus licheniformis DSM 13 BLi03407 -58 6.6 ATATATGTAAATATCAACATGTTT
Bacillus pumilus SAFR-032 BPUM_0712 -59 6.9 AAACATGTAAATCACGACATGTTT
Bacillus subtilis subsp. subtilis str. 168 BSU34400 -48 6.8 GAACATGTAAATAGTTACATGATT