Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YdfF regulog to Bacillus halodurans C-125

Reference regulog properties
Source regulog: YdfF - Bacillales
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode: repressor
Biological process:
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus halodurans C-125
Orthologous TF(s) BH0391
Regulated genes 2
Built upon 10 sites [see more]
Predicted regulatory interactions in Bacillus halodurans C-125
Locus tag Position Score Sequence
Position: -41
Score: 5.7
Sequence: TTCAACTATCATCGAA
Locus tag: BH0391
BH0391 -41 5.7 TTCAACTATCATCGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydfF
Ortholog function: Transcriptional regulator, ArsR family
Bacillus clausii KSM-K16 ABC1174 -43 5.8 TTCCATTATAATCGAA
Bacillus halodurans C-125 BH0391 -41 5.7 TTCAACTATCATCGAA
Bacillus licheniformis DSM 13 BLi03718 -45 5.6 TTCAATTAACATCGAA
Bacillus subtilis subsp. subtilis str. 168 BSU05390 -39 5.7 TTCAACTATCATCGAA
Position: -66
Score: 5.7
Sequence: TTCGATGATAGTTGAA
Locus tag: BH0392
BH0392 -66 5.7 TTCGATGATAGTTGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydfE
Ortholog function: Putative flavoprotein
Bacillus clausii KSM-K16 ABC1173 -68 5.8 TTCGATTATAATGGAA
Bacillus halodurans C-125 BH0392 -66 5.7 TTCGATGATAGTTGAA
Bacillus licheniformis DSM 13 BLi03717 -59 5.6 TTCGATGTTAATTGAA
Bacillus subtilis subsp. subtilis str. 168 BSU05380 -66 5.7 TTCGATGATAGTTGAA
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