Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AraR regulog to Bacillus halodurans C-125

Reference regulog properties
Source regulog: AraR - Bacillales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus halodurans C-125
Orthologous TF(s) BH1875
Regulated genes 5
Built upon 43 sites [see more]
Predicted regulatory interactions in Bacillus halodurans C-125
Locus tag Position Score Sequence
Position: -49
Score: 4.4
Sequence: AAACGTGTACGTACACGATA
Locus tag: BH0902
BH0902 -49 4.4 AAACGTGTACGTACACGATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araP
Ortholog function: Alpha-arabinosides ABC transport system, permease protein 1
Bacillus subtilis subsp. subtilis str. 168 BSU28740 -103 5.9 AAAATTGTTCGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_025800 -99 5.8 AAAATTGTTCGTACAAATAA
-57 5.3 ATATTCGTACGTATATTTTT
Bacillus licheniformis DSM 13 BLi03023 -155 5.2 GAAGTTGTTCGTACAAATAT
-125 5.7 TTAGTTGTACGTACATATAA
Bacillus halodurans C-125 BH0902 -49 4.4 AAACGTGTACGTACACGATA
Position: -172
Score: 5.6
Sequence: TTATTCGTACGAACAAATAA
Locus tag: BH1061
BH1061 -172 5.6 TTATTCGTACGAACAAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH1061
Ortholog function: Alpha-glucuronidase (EC 3.2.1.139)
Bacillus halodurans C-125 BH1061 -172 5.6 TTATTCGTACGAACAAATAA
Position: -198
Score: 6.1
Sequence: AAATTTGTACGTACAAAAAA
Locus tag: BH1861
BH1861 -198 6.1 AAATTTGTACGTACAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: abfA
Ortholog function: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Bacillus subtilis subsp. subtilis str. 168 BSU28720 -103 5.9 AAAATTGTTCGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_025780 -99 5.8 AAAATTGTTCGTACAAATAA
-57 5.3 ATATTCGTACGTATATTTTT
Bacillus licheniformis DSM 13 BLi03021 -155 5.2 GAAGTTGTTCGTACAAATAT
-125 5.7 TTAGTTGTACGTACATATAA
Anoxybacillus flavithermus WK1 Aflv_0533 -54 5.7 AAAAATGTACGTACAAAATT
Bacillus halodurans C-125 BH1861 -198 6.1 AAATTTGTACGTACAAAAAA
-100 5.5 TATTATGTACGTACAAGTTA
Position: -71
Score: 5.7
Sequence: AAAATTGTACGTACAAGTGT
Locus tag: BH1871
BH1871 -71 5.7 AAAATTGTACGTACAAGTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araD
Ortholog function: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Bacillus subtilis subsp. subtilis str. 168 BSU28780 -103 5.9 AAAATTGTTCGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_025840 -99 5.8 AAAATTGTTCGTACAAATAA
-57 5.3 ATATTCGTACGTATATTTTT
Bacillus licheniformis DSM 13 BLi03026 -155 5.2 GAAGTTGTTCGTACAAATAT
-125 5.7 TTAGTTGTACGTACATATAA
Anoxybacillus flavithermus WK1 Aflv_0529 -54 5.7 AAAAATGTACGTACAAAATT
Geobacillus kaustophilus HTA426 GK1906 -61 5.6 AAAATTGTACGTACAATAGT
Bacillus halodurans C-125 BH1871 -71 5.7 AAAATTGTACGTACAAGTGT
Paenibacillus sp. JDR-2 Pjdr2_4207 -62 5.3 AAACATGTACGTACAAGTGT
Position: -36
Score: 5.2
Sequence: TCATTTGTACGTATAAGTTG
Locus tag: BH1875
BH1875 -36 5.2 TCATTTGTACGTATAAGTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: araR
Ortholog function: Transcriptional repressor of arabinoside utilization, GntR family
Bacillus subtilis subsp. subtilis str. 168 BSU33970 -91 5.5 TCAATTGTACGTACTTATAT
-48 6 TAATTAGTACGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_031330 -167 5.6 ACATTTGTACGTACTTATGA
-124 5.4 AAATTAGTACGCACAAATAA
Bacillus pumilus SAFR-032 BPUM_2330 -191 6.1 ATATTTGTACGTACATATGT
Bacillus licheniformis DSM 13 BLi02061 -192 5.8 TTTTTTGTACGTACATATGT
-160 5 TAATATGTTCATATAAATAT
Anoxybacillus flavithermus WK1 Aflv_0528 -81 5.9 AAATATATACGTACAAATAA
Geobacillus kaustophilus HTA426 GK1907 -75 5 ATAATGATACGGACAAATAA
Bacillus halodurans C-125 BH1875 -36 5.2 TCATTTGTACGTATAAGTTG
Oceanobacillus iheyensis HTE831 OB2800 -203 5.4 ATTATTGTACGTACATTTGT
-170 5.9 ATATATATACGTACAAATTA
-63 5.3 AAATATGTACATACAAGTAT
Paenibacillus sp. JDR-2 Pjdr2_4208 -100 4.8 TCACATGTACATACAAGTTA