Propagation of AraR regulog to Bacillus halodurans C-125
| Source regulog: | AraR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Arabinose utilization |
| Effector: | Arabinose |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus halodurans C-125 |
| Orthologous TF(s) | BH1875 |
| Regulated genes | 5 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -49
Score: 4.4 Sequence: AAACGTGTACGTACACGATA
Locus tag: BH0902
|
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| BH0902 | -49 | 4.4 | AAACGTGTACGTACACGATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araP | ||||
| Ortholog function: Alpha-arabinosides ABC transport system, permease protein 1 | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28740 | -103 | 5.9 | AAAATTGTTCGTACAAATAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_025800 | -99 | 5.8 | AAAATTGTTCGTACAAATAA |
| -57 | 5.3 | ATATTCGTACGTATATTTTT | ||
| Bacillus licheniformis DSM 13 | BLi03023 | -155 | 5.2 | GAAGTTGTTCGTACAAATAT |
| -125 | 5.7 | TTAGTTGTACGTACATATAA | ||
| Bacillus halodurans C-125 | BH0902 | -49 | 4.4 | AAACGTGTACGTACACGATA |
|
Position: -172
Score: 5.6 Sequence: TTATTCGTACGAACAAATAA
Locus tag: BH1061
|
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| BH1061 | -172 | 5.6 | TTATTCGTACGAACAAATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH1061 | ||||
| Ortholog function: Alpha-glucuronidase (EC 3.2.1.139) | ||||
| Bacillus halodurans C-125 | BH1061 | -172 | 5.6 | TTATTCGTACGAACAAATAA |
|
Position: -198
Score: 6.1 Sequence: AAATTTGTACGTACAAAAAA
Locus tag: BH1861
|
||||
| BH1861 | -198 | 6.1 | AAATTTGTACGTACAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: abfA | ||||
| Ortholog function: Alpha-N-arabinofuranosidase (EC 3.2.1.55) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28720 | -103 | 5.9 | AAAATTGTTCGTACAAATAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_025780 | -99 | 5.8 | AAAATTGTTCGTACAAATAA |
| -57 | 5.3 | ATATTCGTACGTATATTTTT | ||
| Bacillus licheniformis DSM 13 | BLi03021 | -155 | 5.2 | GAAGTTGTTCGTACAAATAT |
| -125 | 5.7 | TTAGTTGTACGTACATATAA | ||
| Anoxybacillus flavithermus WK1 | Aflv_0533 | -54 | 5.7 | AAAAATGTACGTACAAAATT |
| Bacillus halodurans C-125 | BH1861 | -198 | 6.1 | AAATTTGTACGTACAAAAAA |
| -100 | 5.5 | TATTATGTACGTACAAGTTA | ||
|
Position: -71
Score: 5.7 Sequence: AAAATTGTACGTACAAGTGT
Locus tag: BH1871
|
||||
| BH1871 | -71 | 5.7 | AAAATTGTACGTACAAGTGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araD | ||||
| Ortholog function: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28780 | -103 | 5.9 | AAAATTGTTCGTACAAATAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_025840 | -99 | 5.8 | AAAATTGTTCGTACAAATAA |
| -57 | 5.3 | ATATTCGTACGTATATTTTT | ||
| Bacillus licheniformis DSM 13 | BLi03026 | -155 | 5.2 | GAAGTTGTTCGTACAAATAT |
| -125 | 5.7 | TTAGTTGTACGTACATATAA | ||
| Anoxybacillus flavithermus WK1 | Aflv_0529 | -54 | 5.7 | AAAAATGTACGTACAAAATT |
| Geobacillus kaustophilus HTA426 | GK1906 | -61 | 5.6 | AAAATTGTACGTACAATAGT |
| Bacillus halodurans C-125 | BH1871 | -71 | 5.7 | AAAATTGTACGTACAAGTGT |
| Paenibacillus sp. JDR-2 | Pjdr2_4207 | -62 | 5.3 | AAACATGTACGTACAAGTGT |
|
Position: -36
Score: 5.2 Sequence: TCATTTGTACGTATAAGTTG
Locus tag: BH1875
|
||||
| BH1875 | -36 | 5.2 | TCATTTGTACGTATAAGTTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araR | ||||
| Ortholog function: Transcriptional repressor of arabinoside utilization, GntR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU33970 | -91 | 5.5 | TCAATTGTACGTACTTATAT |
| -48 | 6 | TAATTAGTACGTACAAATAT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_031330 | -167 | 5.6 | ACATTTGTACGTACTTATGA |
| -124 | 5.4 | AAATTAGTACGCACAAATAA | ||
| Bacillus pumilus SAFR-032 | BPUM_2330 | -191 | 6.1 | ATATTTGTACGTACATATGT |
| Bacillus licheniformis DSM 13 | BLi02061 | -192 | 5.8 | TTTTTTGTACGTACATATGT |
| -160 | 5 | TAATATGTTCATATAAATAT | ||
| Anoxybacillus flavithermus WK1 | Aflv_0528 | -81 | 5.9 | AAATATATACGTACAAATAA |
| Geobacillus kaustophilus HTA426 | GK1907 | -75 | 5 | ATAATGATACGGACAAATAA |
| Bacillus halodurans C-125 | BH1875 | -36 | 5.2 | TCATTTGTACGTATAAGTTG |
| Oceanobacillus iheyensis HTE831 | OB2800 | -203 | 5.4 | ATTATTGTACGTACATTTGT |
| -170 | 5.9 | ATATATATACGTACAAATTA | ||
| -63 | 5.3 | AAATATGTACATACAAGTAT | ||
| Paenibacillus sp. JDR-2 | Pjdr2_4208 | -100 | 4.8 | TCACATGTACATACAAGTTA |