Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GlnR regulog to Bacillus halodurans C-125

Reference regulog properties
Source regulog: GlnR - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Nitrogen assimilation
Effector: Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus halodurans C-125
Orthologous TF(s) BH1494
Regulated genes 3
Built upon 45 sites [see more]
Predicted regulatory interactions in Bacillus halodurans C-125
Locus tag Position Score Sequence
Position: -193
Score: 5
Sequence: ATGTTATCTTTGATGACAA
Locus tag: BH0251
BH0251 -193 5 ATGTTATCTTTGATGACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: utrA
Ortholog function: Urea ABC transporter, urea binding protein
Geobacillus kaustophilus HTA426 GK1937 -225 4.3 GTGATAATAAATATAACAA
-202 5.1 ATGTAATAAAATGTGACAA
Bacillus halodurans C-125 BH0251 -193 5 ATGTTATCTTTGATGACAA
-158 4.6 TTGTTAGAAAAGATTACAG
-89 4.8 ATGTAACGATTTCTAACGA
Position: -166
Score: 4.8
Sequence: TCGTTAGAAATCGTTACAT
Position: -62
Score: 5
Sequence: TTGTCATCAAAGATAACAT
Locus tag: BH0252
BH0252 -166 4.8 TCGTTAGAAATCGTTACAT
-62 5 TTGTCATCAAAGATAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ureA
Ortholog function: Urease gamma subunit (EC 3.5.1.5)
Bacillus subtilis subsp. subtilis str. 168 BSU36660 -833 5.1 tTGTaAactTTTaTAACAT
Bacillus amyloliquefaciens FZB42 RBAM_033830 -204 4.8 ATGTAACCTTTCTTCACAT
Bacillus halodurans C-125 BH0252 -166 4.8 TCGTTAGAAATCGTTACAT
-97 4.6 CTGTAATCTTTTCTAACAA
-62 5 TTGTCATCAAAGATAACAT
Position: -111
Score: 5.4
Sequence: TTGTAAGAAAATCTAACAT
Locus tag: BH1494
BH1494 -111 5.4 TTGTAAGAAAATCTAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU13310 -82 5.4 ATGTTAGAAAATATGACAA
Bacillus pumilus SAFR-032 BPUM_1230 -122 4.3 TTGTCAACTTTCCTTCCAT
-81 4.9 GTGTTATATTTTCTAACAA
Bacillus licheniformis DSM 13 BLi01490 -82 4.9 ATGTTAGATTTTCTGACAG
Anoxybacillus flavithermus WK1 Aflv_1544 -114 5.2 TTGTTACTTTTTATAACAT
-83 5.1 TTGTTACTTTTTATAACAA
-28 5.5 ATGTTATAAAATATGACAT
Geobacillus kaustophilus HTA426 GK1860 -87 4.8 ATGTTAATTTTATTTACAA
-34 4.7 ACGTTAGAAAATATAACGT
Bacillus halodurans C-125 BH1494 -111 5.4 TTGTAAGAAAATCTAACAT
Bacillus clausii KSM-K16 ABC1760 -100 5.4 TTGTTAGATTTTCTTACAT
Oceanobacillus iheyensis HTE831 OB1650 -81 5.5 ATGTTAGAAATACTAACAT
Paenibacillus sp. JDR-2 Pjdr2_5154 -303 5.5 TTGTTAGATAATCTAACAT
-42 4.8 GTGTTAGAAAACATTACAT