Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RmgR regulog to Bacillus halodurans C-125

Reference regulog properties
Source regulog: RmgR - Bacillales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus halodurans C-125
Orthologous TF(s) BH0483
Regulated genes 4
Built upon 10 sites [see more]
Predicted regulatory interactions in Bacillus halodurans C-125
Locus tag Position Score Sequence
Position: -174
Score: 5.7
Sequence: GGATTT-(13)-TCATTA
Position: -155
Score: 7.7
Sequence: TCATTA-(13)-TCATTT
Position: -142
Score: 5.2
Sequence: TCACGT-(13)-TCTTTA
Locus tag: BH0484
BH0484 -174 5.7 GGATTT-(13)-TCATTA
-155 7.7 TCATTA-(13)-TCATTT
-142 5.2 TCACGT-(13)-TCTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yteP
Ortholog function: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1
Bacillus subtilis subsp. subtilis str. 168 BSU30135 -154 7.7 TCATTT-(13)-TCTTTT
Bacillus pumilus SAFR-032 BPUM_2660 -223 6.7 CCATTT-(12)-TCTTTT
-155 8.2 TCATTT-(13)-TCATTT
Bacillus licheniformis DSM 13 BLi03166 -139 8.2 TCATTT-(13)-TCATTT
Bacillus halodurans C-125 BH0484 -155 7.7 TCATTA-(13)-TCATTT
Bacillus clausii KSM-K16 ABC1145 -174 5.3 TCATTT-(13)-gCAaaT
Oceanobacillus iheyensis HTE831 OB2090 -169 6.7 TCAATT-(12)-TCATTA
Paenibacillus sp. JDR-2 Pjdr2_1803 -141 6.7 TCAATT-(13)-TCATTA