Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CymR regulog to Bacillus halodurans C-125

Reference regulog properties
Source regulog: CymR - Bacillales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Cysteine metabolism
Effector: O-acetyl-L-serine; CysK, cysteine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus halodurans C-125
Orthologous TF(s) BH1259
Regulated genes 5
Built upon 65 sites [see more]
Predicted regulatory interactions in Bacillus halodurans C-125
Locus tag Position Score Sequence
Position: -39
Score: 5.2
Sequence: GAAAACCAATAAATTTACTTGGGATTA
Locus tag: BH0088
BH0088 -39 5.2 GAAAACCAATAAATTTACTTGGGATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysK
Ortholog function: Cysteine synthase (EC 2.5.1.47)
Bacillus subtilis subsp. subtilis str. 168 BSU00730 -39 5.4 TAATACCAATACAAATAGTCGGAAATT
Bacillus amyloliquefaciens FZB42 RBAM_000840 -39 5.8 TAATACCAATAAATTTAGTCGGAAATT
Bacillus pumilus SAFR-032 BPUM_0057 -40 4.6 TtAaTaCaATaAAATTAcTcGGAgaTA
Bacillus licheniformis DSM 13 BLi00089 -38 5.6 TAATCCCAATAAAATTACTCGGAAATT
Anoxybacillus flavithermus WK1 Aflv_0065 -30 5 CAAATTCTATAAAAATACTCGGGATTA
Geobacillus kaustophilus HTA426 GK0065 -38 4.7 CAAAGTCGATAAAATTAATGGGGATTA
Bacillus cereus ATCC 14579 BC0075 -39 5.3 TAAAACCAATAAAAATACTCGGTGTTA
Bacillus halodurans C-125 BH0088 -39 5.2 GAAAACCAATAAATTTACTTGGGATTA
Bacillus clausii KSM-K16 ABC0109 -42 4.9 TAAAACCAATGAAGATACTAGGGATTG
Oceanobacillus iheyensis HTE831 OB0084 -41 6 TAAATCTTATAAAAATACTTGGAATTA
Paenibacillus sp. JDR-2 Pjdr2_0074 -44 5.7 AAAAACCAACTAAATTAGTCGGAATAA
Position: -87
Score: 5.7
Sequence: TAAAACCAATTTGACTTATCGGAATAA
Locus tag: BH0609
BH0609 -87 5.7 TAAAACCAATTTGACTTATCGGAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysJ
Ortholog function: Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2)
Bacillus licheniformis DSM 13 BLi01302 -105 5.5 TAAAACCGATTTGATTTATAGGAATAG
Anoxybacillus flavithermus WK1 Aflv_1597 -48 5.4 TAAAACATACTTGATTTATAGGAATAG
Bacillus halodurans C-125 BH0609 -87 5.7 TAAAACCAATTTGACTTATCGGAATAA
Bacillus clausii KSM-K16 ABC0618 -265 4.9 AAATACCGAGTTTGTTAATCAGGATAA
Oceanobacillus iheyensis HTE831 OB1653 -98 5.4 CAATTCACATTGTATTACTATGAATTA
Position: -73
Score: 5.3
Sequence: TAAATCATATCAAATTACATGGAATTA
Locus tag: BH1485
BH1485 -73 5.3 TAAATCATATCAAATTACATGGAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH1485
Ortholog function: Hypothetical protein
Bacillus halodurans C-125 BH1485 -73 5.3 TAAATCATATCAAATTACATGGAATTA
Position: -53
Score: 5.3
Sequence: TAAAACATAGTAAACAGATATGAATTT
Locus tag: BH1489
BH1489 -53 5.3 TAAAACATAGTAAACAGATATGAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysC
Ortholog function: Adenylylsulfate kinase (EC 2.7.1.25)
Bacillus amyloliquefaciens FZB42 RBAM_015430 -299 4.7 TTATTCCTATCAAAAAACTCGGGTTGA
Anoxybacillus flavithermus WK1 Aflv_0313 -48 5.6 TTAATCCTAGTTGTTTTATAAGAATAA
Bacillus halodurans C-125 BH1489 -53 5.3 TAAAACATAGTAAACAGATATGAATTT
Bacillus clausii KSM-K16 ABC0614 -265 4.9 AAATACCGAGTTTGTTAATCAGGATAA
Oceanobacillus iheyensis HTE831 OB1661 -98 5.4 CAATTCACATTGTATTACTATGAATTA
Position: -52
Score: 5.2
Sequence: TAAAACAGATATAAAAACTCGGAAATA
Locus tag: BH1495
BH1495 -52 5.2 TAAAACAGATATAAAAACTCGGAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ABC0615
Ortholog function: uroporphyrin-III C-methyltransferase
Bacillus clausii KSM-K16 ABC0615 -265 4.9 AAATACCGAGTTTGTTAATCAGGATAA