Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fnr regulog to Bacillus halodurans C-125

Reference regulog properties
Source regulog: Fnr - Bacillales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus halodurans C-125
Orthologous TF(s) BH0231
Regulated genes 3
Built upon 39 sites [see more]
Predicted regulatory interactions in Bacillus halodurans C-125
Locus tag Position Score Sequence
Position: -74
Score: 4.8
Sequence: TGTGAACCATGTCACT
Locus tag: BH0229
BH0229 -74 4.8 TGTGAACCATGTCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: arfM
Ortholog function: Anaerobic respiration and fermentation modulator
Bacillus subtilis subsp. subtilis str. 168 BSU37290 -73 5.6 TGTGAAATACATCACT
Bacillus licheniformis DSM 13 BLi02078 -73 5.7 TGTGAATTAAATCACT
Bacillus halodurans C-125 BH0229 -74 4.8 TGTGAACCATGTCACT
Position: -274
Score: 6
Sequence: TGTGAAATATTTCACA
Position: -217
Score: 6
Sequence: TGTGAAATATTTCACA
Position: -42
Score: 4.8
Sequence: TGTGAAAATATTCACA
Locus tag: BH3937
BH3937 -274 6 TGTGAAATATTTCACA
-217 6 TGTGAAATATTTCACA
-42 4.8 TGTGAAAATATTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Bacillus subtilis subsp. subtilis str. 168 BSU03050 -83 4.7 TGTGAAGTGTTGCACA
-60 6 TGTGAAATACTTCACA
Bacillus amyloliquefaciens FZB42 RBAM_003290 -80 5.4 TGTGAAGTATTGCACA
-57 6 TGTGAAATACTTCACA
Bacillus pumilus SAFR-032 BPUM_0277 -77 5.4 TGTGAAGTATTGCACA
-54 6 TGTGAAATACTTCACA
Bacillus licheniformis DSM 13 BLi00366 -80 5.4 TGTGAAGTATTGCACA
-57 5.4 TGTGAAGAATTTCACA
Geobacillus kaustophilus HTA426 GK0475 -40 4.9 TGTGAATATATTCACA
Bacillus halodurans C-125 BH3937 -274 6 TGTGAAATATTTCACA
-217 6 TGTGAAATATTTCACA
-42 4.8 TGTGAAAATATTCACA
Bacillus clausii KSM-K16 ABC2872 -66 5.4 TGTGAAATAATGCACA
-43 5.4 TGTGAATAATTTCACA
Oceanobacillus iheyensis HTE831 OB3279 -66 6 TGTGAAATATTTCACA