Propagation of XylR regulog to Bacillus halodurans C-125
| Source regulog: | XylR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | ROK |
| Regulation mode: | repressor |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus halodurans C-125 |
| Orthologous TF(s) | BH2758 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -192
Score: 5.8 Sequence: AGTTTGTTCACTGGATCAACTAAGT
Locus tag: BH2120
|
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| BH2120 | -192 | 5.8 | AGTTTGTTCACTGGATCAACTAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xynA | ||||
| Ortholog function: Endo-1,4-beta-xylanase A precursor (EC 3.2.1.8) | ||||
| Bacillus halodurans C-125 | BH2120 | -192 | 5.8 | AGTTTGTTCACTGGATCAACTAAGT |
|
Position: -102
Score: 6.7 Sequence: AGTTTGTCTATTGAATAAACTAAGT
Locus tag: BH2757
|
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| BH2757 | -102 | 6.7 | AGTTTGTCTATTGAATAAACTAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17600 | -100 | 6.6 | AGTTAGTTTGTTTAAACAACAAACT |
| Bacillus amyloliquefaciens FZB42 | RBAM_017350 | -101 | 6.1 | AGTTAGTTTGTTTGGGCAACAAACT |
| Bacillus pumilus SAFR-032 | BPUM_1829 | -47 | 5.9 | AGTTTGTTGAATCAACTTACAAAGT |
| Bacillus licheniformis DSM 13 | BLi04048 | -69 | 6.4 | AGTTAGTTTAATGGTTAAACAAACA |
| Geobacillus kaustophilus HTA426 | GK1875 | -87 | 6.3 | ACTTTGTTTATATGATAGACAAACA |
| Bacillus halodurans C-125 | BH2757 | -102 | 6.7 | AGTTTGTCTATTGAATAAACTAAGT |
| Bacillus clausii KSM-K16 | ABC0572 | -45 | 6.3 | ACTTAGTTTAAATAATAAACAAACC |
| Oceanobacillus iheyensis HTE831 | OB3119 | -44 | 6.7 | ACTTTGTTTGTTAGATAAACAAACA |
| Paenibacillus sp. JDR-2 | Pjdr2_5159 | -123 | 6.7 | AGTTTGTTTAATAGACAAACTAAGT |
|
Position: -151
Score: 6.7 Sequence: ACTTAGTTTATTCAATAGACAAACT
Locus tag: BH2758
|
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| BH2758 | -151 | 6.7 | ACTTAGTTTATTCAATAGACAAACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylR | ||||
| Ortholog function: Transcriptional repressor of the xylose metabolism, ROK family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17590 | -268 | 6.6 | AGTTTGTTGTTTAAACAAACTAACT |
| Bacillus amyloliquefaciens FZB42 | RBAM_017340 | -187 | 6.1 | AGTTTGTTGCCCAAACAAACTAACT |
| Bacillus pumilus SAFR-032 | BPUM_1830 | -191 | 5.9 | ACTTTGTAAGTTGATTCAACAAACT |
| Bacillus licheniformis DSM 13 | BLi04049 | -147 | 6.4 | TGTTTGTTTAACCATTAAACTAACT |
| Geobacillus kaustophilus HTA426 | GK2422 | -230 | 6 | AATTAGTTTATTATATAAACTAAGA |
| Bacillus halodurans C-125 | BH2758 | -151 | 6.7 | ACTTAGTTTATTCAATAGACAAACT |
| Oceanobacillus iheyensis HTE831 | OB3124 | -87 | 5.8 | TGTTTGTCTACCGGTTAAACAAAGT |
| Paenibacillus sp. JDR-2 | Pjdr2_5182 | -113 | 6.7 | AGTTTGTCTATTAAACAAACTAAGT |
|
Position: -165
Score: 6.1 Sequence: ACTTTGTTTAATGGTAAAACAAAGT
Locus tag: BH3678
|
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| BH3678 | -165 | 6.1 | ACTTTGTTTAATGGTAAAACAAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH3678 | ||||
| Ortholog function: Two-component sensor histidine kinase | ||||
| Bacillus halodurans C-125 | BH3678 | -165 | 6.1 | ACTTTGTTTAATGGTAAAACAAAGT |