Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of SinR regulog to Bacillus halodurans C-125

Reference regulog properties
Source regulog: SinR - Bacillales
Regulator type: Transcription factor
Regulator family: XRE
Regulation mode: repressor
Biological process: Biofilm formation
Effector: SinI, antirepressor protein
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus halodurans C-125
Orthologous TF(s) BH2125
Regulated genes 1
Built upon 15 sites [see more]
Predicted regulatory interactions in Bacillus halodurans C-125
Locus tag Position Score Sequence
Position: -131
Score: 5.7
Sequence: GTTCTTTATAAAAAAC
Position: 6
Score: 6.3
Sequence: GTTCTTTATAAAGAAC
Locus tag: BH2131
BH2131 -131 5.7 GTTCTTTATAAAAAAC
6 6.3 GTTCTTTATAAAGAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqxM
Ortholog function: Lipoprotein for biofilm formation
Bacillus amyloliquefaciens FZB42 RBAM_022960 -55 6.1 GTTCTTTAAAGAGAAC
Bacillus halodurans C-125 BH2131 -131 5.7 GTTCTTTATAAAAAAC
Bacillus licheniformis DSM 13 BLi02639 -55 5.9 GTTCTTTAAAACGAAC
Bacillus pumilus SAFR-032 BPUM_2196 -41 6.3 GTTCTTTTTAAAGAAC
Bacillus subtilis subsp. subtilis str. 168 BSU24640 -57 6.1 GTTCTTTAAAGAGAAC
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