Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YybA regulog to Bacillus halodurans C-125

Reference regulog properties
Source regulog: YybA - Bacillales
Regulator type: Transcription factor
Regulator family: MarR
Regulation mode: repressor
Biological process: Polyamine homeostasis
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus halodurans C-125
Orthologous TF(s) BH3077
Regulated genes 2
Built upon 25 sites [see more]
Predicted regulatory interactions in Bacillus halodurans C-125
Locus tag Position Score Sequence
Position: -89
Score: 7
Sequence: TTTTTGTTGCATTTACAACAAATT
Position: -42
Score: 6.6
Sequence: TTATTGTTGCATTTGCAATATAAA
Locus tag: BH3077
BH3077 -89 7 TTTTTGTTGCATTTACAACAAATT
-42 6.6 TTATTGTTGCATTTGCAATATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yybA
Ortholog function: Transcriptional regulator, MarR family
Bacillus amyloliquefaciens FZB42 RBAM_037790 -44 6.9 ATTATATTGCATATGCAACAAAAA
Bacillus clausii KSM-K16 ABC3242 -90 6.8 TTTTTATTGCAAATACAATAAAAT
-45 7.2 TTTTTGTTGCATTTACAACAAAAA
Bacillus halodurans C-125 BH3077 -89 7 TTTTTGTTGCATTTACAACAAATT
-42 6.6 TTATTGTTGCATTTGCAATATAAA
Bacillus licheniformis DSM 13 BLi00581 -89 6.8 TTTTTATTGCAAATGCAACAATAT
-42 6.9 ATTATATTGCATTTGCAACAAAAA
Bacillus subtilis subsp. subtilis str. 168 BSU40710 -43 7.2 TTTTTGTTGTAATTGCAACAAAAA
Oceanobacillus iheyensis HTE831 OB1246 -91 7 TTTTTGTTGCAAATACAACATAAT
-43 6.6 TAAATGTTGCATTTGCAACAAAAA
Paenibacillus sp. JDR-2 Pjdr2_5021 -47 6.7 TTATTGTTGTAAATGCAACAAATT
Position: -44
Score: 7
Sequence: AATTTGTTGTAAATGCAACAAAAA
Locus tag: BH3078
BH3078 -44 7 AATTTGTTGTAAATGCAACAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yyaS
Ortholog function: Putative integral inner membrane protein
Bacillus amyloliquefaciens FZB42 RBAM_031710 -93 6.5 TTTTTGTTGTATTTGCAATGAAAA
-46 7 ATTTTGTTGTATTTGCAACATAAA
Bacillus halodurans C-125 BH3078 -91 6.6 TTTATATTGCAAATGCAACAATAA
-44 7 AATTTGTTGTAAATGCAACAAAAA
Bacillus licheniformis DSM 13 BLi00580 -92 6.9 TTTTTGTTGCAAATGCAATATAAT
-45 6.8 ATATTGTTGCATTTGCAATAAAAA
Bacillus subtilis subsp. subtilis str. 168 BSU40730 -100 7.2 TTTTTGTTGCAATTACAACAAAAA
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