Propagation of MalR regulog to Bacillus subtilis subsp. subtilis str. SMY
| Source regulog: | MalR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | CitB |
| Regulation mode: | activator |
| Biological process: | Malate utilization |
| Effector: | MalK, sensor histidine kinase (malate) |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus subtilis subsp. subtilis str. SMY |
| Orthologous TF(s) | BsubsS_010100017171 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -103
Score: 5.7 Sequence: CTAACCTTTGT-(5)-TTAATTAATTA
Position: -102
Score: 6.3 Sequence: TAACCTTTGTG-(4)-TTAATTAATTA
Position: -97
Score: 6.5 Sequence: TTTGTGTTTTT-(3)-TTAATTAAAAT
Position: -96
Score: 6.5 Sequence: TTGTGTTTTTT-(2)-TTAATTAAAAT
Position: -95
Score: 5.4 Sequence: TGTGTTTTTTA-(5)-TTAAAATGTTT
Position: -93
Score: 5.3 Sequence: TGTTTTTTAAT-(3)-TTAAAATGTTT
Position: -92
Score: 5.8 Sequence: GTTTTTTAATT-(2)-TTAAAATGTTT
Position: -91
Score: 6.1 Sequence: TTTTTTAATTA-(13)-TTAACTTAGTT
Position: -88
Score: 7.3 Sequence: TTTAATTAATT-(10)-TTAACTTAGTT
Position: -87
Score: 7.4 Sequence: TTAATTAATTA-(9)-TTAACTTAGTT
Position: -83
Score: 7.3 Sequence: TTAATTAAAAT-(5)-TTAACTTAGTT
Position: -79
Score: 5.3 Sequence: TTAAAATGTTT-(2)-TAACTTAGTTA
Locus tag: BsubsS_010100004224
|
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| BsubsS_010100004224 | -103 | 5.7 | CTAACCTTTGT-(5)-TTAATTAATTA | |
| -102 | 6.3 | TAACCTTTGTG-(4)-TTAATTAATTA | ||
| -97 | 6.5 | TTTGTGTTTTT-(3)-TTAATTAAAAT | ||
| -96 | 6.5 | TTGTGTTTTTT-(2)-TTAATTAAAAT | ||
| -95 | 5.4 | TGTGTTTTTTA-(5)-TTAAAATGTTT | ||
| -93 | 5.3 | TGTTTTTTAAT-(3)-TTAAAATGTTT | ||
| -92 | 5.8 | GTTTTTTAATT-(2)-TTAAAATGTTT | ||
| -91 | 6.1 | TTTTTTAATTA-(13)-TTAACTTAGTT | ||
| -88 | 7.3 | TTTAATTAATT-(10)-TTAACTTAGTT | ||
| -87 | 7.4 | TTAATTAATTA-(9)-TTAACTTAGTT | ||
| -83 | 7.3 | TTAATTAAAAT-(5)-TTAACTTAGTT | ||
| -79 | 5.3 | TTAAAATGTTT-(2)-TAACTTAGTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yflS | ||||
| Ortholog function: Putative malate transporter | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_007730 | -89 | 5.2 | TTTTTTAATTA-(9)-TTTATTAACTT |
| Bacillus halodurans C-125 | BH3327 | -63 | 7.4 | TTGCTCTTTTA-(6)-CTACTTTTTTT |
| -46 | 7.7 | CTACTTTTTTT-(6)-TTAGGTTAATC | ||
| Bacillus subtilis subsp. subtilis str. 168 | BSU07570 | -91 | 5.2 | TTTTTTAATTA-(9)-TTTATTAACTT |
|
Position: -120
Score: 7.4 Sequence: TTTTTTCTAAT-(13)-TTAATTTAATT
Position: -119
Score: 7.6 Sequence: TTTTTCTAATC-(12)-TTAATTTAATT
Position: -96
Score: 9 Sequence: TTAATTTAATT-(5)-TTAGTTTTTTA
Locus tag: BsubsS_010100017196
|
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| BsubsS_010100017196 | -120 | 7.4 | TTTTTTCTAAT-(13)-TTAATTTAATT | |
| -119 | 7.6 | TTTTTCTAATC-(12)-TTAATTTAATT | ||
| -96 | 9 | TTAATTTAATT-(5)-TTAGTTTTTTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: maeN | ||||
| Ortholog function: Malate Na(+) symporter | ||||
| Bacillus licheniformis DSM 13 | BLi03342 | -98 | 9.4 | TTAATTTAATT-(9)-TTATTTTAATT |
| Bacillus pumilus SAFR-032 | BPUM_2827 | -96 | 8.3 | TTATTTTACTT-(9)-TTAATTTAGTT |
| Bacillus subtilis subsp. subtilis str. 168 | BSU31580 | -96 | 7.3 | TTAATTTAATT-(9)-TTTTTTAACTT |
|
Position: -74
Score: 5.3 Sequence: GTAAATTTTTC-(11)-AAGCTTTTTGT
Position: -73
Score: 5.7 Sequence: TAAATTTTTCT-(10)-AAGCTTTTTGT
Locus tag: BsubsS_010100020046
|
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| BsubsS_010100020046 | -74 | 5.3 | GTAAATTTTTC-(11)-AAGCTTTTTGT | |
| -73 | 5.7 | TAAATTTTTCT-(10)-AAGCTTTTTGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywkB | ||||
| Ortholog function: Malate permease | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU37040 | -156 | -1 | AATTTAAATAA-(10)-AAATTAAGTAA |
|
Position: -243
Score: 5.3 Sequence: GTGTTTTTTTT-(5)-CTGATAATATT
Position: -240
Score: 5.8 Sequence: TTTTTTTTATA-(11)-TTCAATTAAAA
Position: -239
Score: 5.1 Sequence: TTTTTTTATAT-(10)-TTCAATTAAAA
Position: -238
Score: 5.5 Sequence: TTTTTTATATT-(9)-TTCAATTAAAA
Position: -227
Score: 5.1 Sequence: CTGATAATATT-(7)-AAAATTTAAAT
Position: -222
Score: 5.1 Sequence: AATATTCAATT-(11)-ATAAGTATATT
Position: -218
Score: 5.3 Sequence: TTCAATTAAAA-(7)-ATAAGTATATT
Position: -217
Score: 5.3 Sequence: TCAATTAAAAA-(6)-ATAAGTATATT
Position: -213
Score: 5.6 Sequence: TTAAAAAATTT-(2)-ATAAGTATATT
Position: -205
Score: 5.4 Sequence: TTTAAATAAGT-(11)-TTAAGTAATTT
Position: -204
Score: 5.9 Sequence: TTAAATAAGTA-(10)-TTAAGTAATTT
Position: -200
Score: 6.8 Sequence: ATAAGTATATT-(10)-GTAATTTTCTT
Position: -199
Score: 6.1 Sequence: TAAGTATATTA-(9)-GTAATTTTCTT
Position: -191
Score: 5.3 Sequence: TTAAAAAATTA-(6)-TTTCTTCTCTT
Position: -188
Score: 5.4 Sequence: AAAAATTAAGT-(13)-TGAATTTTGAT
Position: -184
Score: 5.4 Sequence: ATTAAGTAATT-(9)-TGAATTTTGAT
Position: -183
Score: 6.6 Sequence: TTAAGTAATTT-(8)-TGAATTTTGAT
Position: -182
Score: 5.6 Sequence: TAAGTAATTTT-(7)-TGAATTTTGAT
Position: -179
Score: 7.1 Sequence: GTAATTTTCTT-(4)-TGAATTTTGAT
Position: -178
Score: 6 Sequence: TAATTTTCTTC-(3)-TGAATTTTGAT
Position: -174
Score: 6.1 Sequence: TTTCTTCTCTT-(5)-TTGATTTTGAC
Position: -63
Score: 6 Sequence: GTCATATTTTA-(9)-TTACTTAACTT
Position: -60
Score: 6.2 Sequence: ATATTTTAGAT-(6)-TTACTTAACTT
Position: -55
Score: 5.5 Sequence: TTAGATGGGTT-(5)-TTAACTTGGTT
Position: -44
Score: 5.2 Sequence: ATTACTTAACT-(3)-TTAACTATTTC
Position: -43
Score: 6.8 Sequence: TTACTTAACTT-(2)-TTAACTATTTC
Locus tag: BsubsS_010100020051
|
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| BsubsS_010100020051 | -243 | 5.3 | GTGTTTTTTTT-(5)-CTGATAATATT | |
| -240 | 5.8 | TTTTTTTTATA-(11)-TTCAATTAAAA | ||
| -239 | 5.1 | TTTTTTTATAT-(10)-TTCAATTAAAA | ||
| -238 | 5.5 | TTTTTTATATT-(9)-TTCAATTAAAA | ||
| -227 | 5.1 | CTGATAATATT-(7)-AAAATTTAAAT | ||
| -222 | 5.1 | AATATTCAATT-(11)-ATAAGTATATT | ||
| -218 | 5.3 | TTCAATTAAAA-(7)-ATAAGTATATT | ||
| -217 | 5.3 | TCAATTAAAAA-(6)-ATAAGTATATT | ||
| -213 | 5.6 | TTAAAAAATTT-(2)-ATAAGTATATT | ||
| -205 | 5.4 | TTTAAATAAGT-(11)-TTAAGTAATTT | ||
| -204 | 5.9 | TTAAATAAGTA-(10)-TTAAGTAATTT | ||
| -200 | 6.8 | ATAAGTATATT-(10)-GTAATTTTCTT | ||
| -199 | 6.1 | TAAGTATATTA-(9)-GTAATTTTCTT | ||
| -191 | 5.3 | TTAAAAAATTA-(6)-TTTCTTCTCTT | ||
| -188 | 5.4 | AAAAATTAAGT-(13)-TGAATTTTGAT | ||
| -184 | 5.4 | ATTAAGTAATT-(9)-TGAATTTTGAT | ||
| -183 | 6.6 | TTAAGTAATTT-(8)-TGAATTTTGAT | ||
| -182 | 5.6 | TAAGTAATTTT-(7)-TGAATTTTGAT | ||
| -179 | 7.1 | GTAATTTTCTT-(4)-TGAATTTTGAT | ||
| -178 | 6 | TAATTTTCTTC-(3)-TGAATTTTGAT | ||
| -174 | 6.1 | TTTCTTCTCTT-(5)-TTGATTTTGAC | ||
| -63 | 6 | GTCATATTTTA-(9)-TTACTTAACTT | ||
| -60 | 6.2 | ATATTTTAGAT-(6)-TTACTTAACTT | ||
| -55 | 5.5 | TTAGATGGGTT-(5)-TTAACTTGGTT | ||
| -44 | 5.2 | ATTACTTAACT-(3)-TTAACTATTTC | ||
| -43 | 6.8 | TTACTTAACTT-(2)-TTAACTATTTC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywkA | ||||
| Ortholog function: NAD-dependent malate dehydrogenase (EC 1.1.1.38) | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_034210 | -206 | -0.8 | AACTTAAAAAA-(10)-AAATTAAGTAA |
| Bacillus licheniformis DSM 13 | BLi03953 | -242 | -0.8 | AACTTAATTAA-(10)-AAATTAACTAA |
| Bacillus pumilus SAFR-032 | BPUM_3348 | -209 | 0.5 | AAATTAAATAA-(10)-AAATTATCTAA |
| Bacillus subtilis subsp. subtilis str. 168 | BSU37050 | -156 | -1 | AATTTAAATAA-(10)-AAATTAAGTAA |