Propagation of TnrA regulog to Bacillus subtilis subsp. subtilis str. SMY
| Source regulog: | TnrA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | MerR |
| Regulation mode: | repressor (activator) |
| Biological process: | Nitrogen assimilation |
| Effector: | NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus subtilis subsp. subtilis str. SMY |
| Orthologous TF(s) | BsubsS_010100007362 |
| Regulated genes | 54 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -84
Score: 3.9 Sequence: TGAGAGAAAAGCTGACT
Locus tag: BsubsS_010100001524
|
||||
| BsubsS_010100001524 | -84 | 3.9 | TGAGAGAAAAGCTGACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ansZ | ||||
| Ortholog function: L-asparaginase (EC 3.5.1.1) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU02690 | -84 | 3.9 | TGAGAGAAAAGCTGACT |
|
Position: -48
Score: 4.4 Sequence: TATGATAAAATATAACA
Position: 1
Score: 3.5 Sequence: TGAGAGCAAAGATTCCA
Locus tag: BsubsS_010100001589
|
||||
| BsubsS_010100001589 | -48 | 4.4 | TATGATAAAATATAACA | |
| 1 | 3.5 | TGAGAGCAAAGATTCCA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rapJ | ||||
| Ortholog function: Response regulator aspartate phosphatase I (EC 3.1.-.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU02820 | -48 | 4.4 | TATGATAAAATATAACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_003080 | -48 | 4.4 | TATGATAAAATATAACA |
| Bacillus pumilus SAFR-032 | BPUM_1615 | -89 | 3.4 | TTATGTAATAACTTACA |
| Bacillus licheniformis DSM 13 | BLi03446 | -107 | 4.1 | TGTGAAAAATTATTACT |
|
Position: -85
Score: 5.3 Sequence: TGTTACATTTTATAACA
Locus tag: BsubsS_010100001864
|
||||
| BsubsS_010100001864 | -85 | 5.3 | TGTTACATTTTATAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nasD | ||||
| Ortholog function: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03300 | -95 | 4.1 | TCGTATATTTTGTTACA |
| -85 | 5.3 | TGTTACATTTTATAACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_003510 | -84 | 4.9 | TGTTACATTTCATAACA |
| Bacillus licheniformis DSM 13 | BLi00484 | -87 | 5 | TGTCAGGAAATGTAACA |
| Geobacillus kaustophilus HTA426 | GK1868 | -286 | 4.6 | TGTGATAAAAAGTTACA |
| -202 | 5.2 | TGTTATATAAACTGACA | ||
| Bacillus halodurans C-125 | BH0613 | -80 | 4.6 | TGTAAGATATCCTCCCA |
| Bacillus clausii KSM-K16 | ABC1621 | -89 | 5.2 | TGTCACAAAATATTACA |
|
Position: -98
Score: 4.9 Sequence: TGTAAGTTTTTGTGACA
Locus tag: BsubsS_010100001874
|
||||
| BsubsS_010100001874 | -98 | 4.9 | TGTAAGTTTTTGTGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nasB | ||||
| Ortholog function: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03320 | -98 | 4.9 | TGTAAGTTTTTGTGACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_003530 | -100 | 4.8 | TGTAAGATAATGCGACA |
| Bacillus licheniformis DSM 13 | BLi00482 | -87 | 5 | TGTCAGGAAATGTAACA |
| Bacillus clausii KSM-K16 | ABC1623 | -89 | 5.2 | TGTCACAAAATATTACA |
| Paenibacillus sp. JDR-2 | Pjdr2_2175 | -223 | 4 | TGTCAATAAACTTAACA |
| -159 | 4 | TGTGACCTATATTGACA | ||
|
Position: -98
Score: 4.9 Sequence: TGTCACAAAAACTTACA
Locus tag: BsubsS_010100001879
|
||||
| BsubsS_010100001879 | -98 | 4.9 | TGTCACAAAAACTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nasA | ||||
| Ortholog function: Nitrate/nitrite transporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03330 | -98 | 4.9 | TGTCACAAAAACTTACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_003540 | -97 | 4.8 | TGTCGCATTATCTTACA |
| Bacillus licheniformis DSM 13 | BLi00365 | -87 | 4.7 | TGTTAGTAAAGCTTACA |
| Bacillus clausii KSM-K16 | ABC1625 | -89 | 5.2 | TGTCACAAAATATTACA |
|
Position: -212
Score: 3.6 Sequence: TCTAAAATTTTATTAAA
Position: -175
Score: 4.9 Sequence: TGTAAGAAAATCTCACG
Locus tag: BsubsS_010100002094
|
||||
| BsubsS_010100002094 | -212 | 3.6 | TCTAAAATTTTATTAAA | |
| -175 | 4.9 | TGTAAGAAAATCTCACG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yclF | ||||
| Ortholog function: Di-tripeptide-proton ABC symporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03670 | -212 | 3.6 | TCTAAAATTTTATTAAA |
| -175 | 4.9 | TGTAAGAAAATCTCACG | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_003840 | -211 | 3.4 | CTTTAAATTTTATTAAA |
| -174 | 4.9 | AGTCAGATAATATAACA | ||
| Bacillus pumilus SAFR-032 | BPUM_0343 | -183 | 3.8 | TTAAATAAATTCTTTCA |
| -141 | 3.7 | TGAAAGAATTTTTCATA | ||
| Bacillus licheniformis DSM 13 | BLi00449 | -180 | 3.9 | TATTAAAAAATCTTTCA |
| Geobacillus kaustophilus HTA426 | GK2020 | -44 | 3.5 | TGAATTATTATATTAAA |
|
Position: -121
Score: 4.9 Sequence: CGTGAGATTTTCTTACA
Locus tag: BsubsS_010100002099
|
||||
| BsubsS_010100002099 | -121 | 4.9 | CGTGAGATTTTCTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yclG | ||||
| Ortholog function: Pectate lyase family protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU03680 | -121 | 4.9 | CGTGAGATTTTCTTACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_003850 | -121 | 4.9 | TGTTATATTATCTGACT |
| Bacillus pumilus SAFR-032 | BPUM_0344 | -73 | 3.8 | TGAAAGAATTTATTTAA |
| Bacillus licheniformis DSM 13 | BLi00451 | 1 | 3.9 | TGAAAGATTTTTTAATA |
|
Position: -145
Score: 4.9 Sequence: TGGTAGGTTTTCTGACA
Locus tag: BsubsS_010100002319
|
||||
| BsubsS_010100002319 | -145 | 4.9 | TGGTAGGTTTTCTGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lamB | ||||
| Ortholog function: Lactam utilization protein LamB | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU04050 | -145 | 4.9 | TGGTAGGTTTTCTGACA |
| -52 | 3.9 | CGGGACAATAAATGACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_004280 | -137 | 4.9 | TGGTAGGTTTTCTGACA |
| Bacillus pumilus SAFR-032 | BPUM_0379 | -113 | 5.5 | TGTTATATTTTCTAACA |
| Bacillus licheniformis DSM 13 | BLi00498 | -155 | 4.6 | TGTGAGGTTTCCTAACA |
|
Position: -55
Score: 4.5 Sequence: AGGAAGAAAATCTAACA
Locus tag: BsubsS_010100002384
|
||||
| BsubsS_010100002384 | -55 | 4.5 | AGGAAGAAAATCTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydaB | ||||
| Ortholog function: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU04170 | -55 | 4.5 | AGGAAGAAAATCTAACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_004400 | -54 | 4.5 | AGAAAGAAAATCTGACA |
| Bacillus pumilus SAFR-032 | BPUM_0239 | -70 | 4.5 | TGAGATAAAATCTGCCA |
| Bacillus licheniformis DSM 13 | BLi00300 | 3 | 4.3 | CGTCACATAATCTCACC |
|
Position: -103
Score: 5.1 Sequence: TGGTATATTTTCTTACA
Locus tag: BsubsS_010100003554
|
||||
| BsubsS_010100003554 | -103 | 5.1 | TGGTATATTTTCTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gabP | ||||
| Ortholog function: Gamma-aminobutyrate (GABA) permease | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU06310 | -103 | 5.1 | TGGTATATTTTCTTACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_006710 | -100 | 5.4 | TGTCATATTTTCTTACA |
|
Position: -43
Score: 4.9 Sequence: TGGAATAAAATCTCACA
Locus tag: BsubsS_010100004219
|
||||
| BsubsS_010100004219 | -43 | 4.9 | TGGAATAAAATCTCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pel | ||||
| Ortholog function: Pectate lyase precursor (EC 4.2.2.2) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU07560 | -43 | 4.9 | TGGAATAAAATCTCACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_007720 | -40 | 4.4 | TGTAATAAATTGGAACA |
| Bacillus licheniformis DSM 13 | BLi01404 | -114 | 4.6 | TGTCATAAAATTTGAAA |
|
Position: -40
Score: 4.7 Sequence: TGTTAAATAATTTCACA
Locus tag: BsubsS_010100006172
|
||||
| BsubsS_010100006172 | -40 | 4.7 | TGTTAAATAATTTCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argC | ||||
| Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU11190 | -40 | 4.7 | TGTTAAATAATTTCACA |
| 16 | 4.2 | TGTTAGAAGATGGGACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_011190 | -38 | 4.7 | TGTTAAATAATTTCACA |
| Bacillus pumilus SAFR-032 | BPUM_1042 | -34 | 4.7 | TGTTAAATAATTTCACA |
| Bacillus licheniformis DSM 13 | BLi01206 | -40 | 4.7 | TGTTAAATAATTTCACA |
|
Position: -119
Score: 4.1 Sequence: TGTAATAATATACAACT
Locus tag: BsubsS_010100006262
|
||||
| BsubsS_010100006262 | -119 | 4.1 | TGTAATAATATACAACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: appD | ||||
| Ortholog function: Oligopeptide ABC transporter (ATP-binding protein) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU11360 | -119 | 4.1 | TGTAATAATATACAACT |
| Bacillus amyloliquefaciens FZB42 | RBAM_011360 | -101 | 4.1 | TGTAATAATATACAACT |
| Bacillus clausii KSM-K16 | ABC2416 | -111 | 4.2 | TGTGAGAAAATCTATTA |
| Oceanobacillus iheyensis HTE831 | OB2264 | -146 | 4.4 | TGTCGAATTTTGTAACA |
|
Position: -231
Score: 4.3 Sequence: TGGAAGAAAAACTAACG
Locus tag: BsubsS_010100006302
|
||||
| BsubsS_010100006302 | -231 | 4.3 | TGGAAGAAAAACTAACG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: oppA | ||||
| Ortholog function: Oligopeptide ABC transporter (binding lipoprotein) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU11430 | -231 | 4.3 | TGGAAGAAAAACTAACG |
| Bacillus amyloliquefaciens FZB42 | RBAM_011430 | -231 | 4.3 | TGACAGAAAAACTGACC |
| Bacillus licheniformis DSM 13 | BLi01232 | -249 | 4.9 | TGGCAGAAAACCTGACA |
|
Position: -81
Score: 5.5 Sequence: TGTTAGAAAATATGACA
Locus tag: BsubsS_010100007362
|
||||
| BsubsS_010100007362 | -81 | 5.5 | TGTTAGAAAATATGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tnrA | ||||
| Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU13310 | -124 | 3.9 | TGTTAATTTTTCTTCCG |
| -81 | 5.5 | TGTTAGAAAATATGACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_013130 | -124 | 4.1 | TGTCAATTTTTCTGCCG |
| -81 | 4.8 | CGTCAGAAAACCTGACA | ||
| Bacillus pumilus SAFR-032 | BPUM_1230 | -121 | 4 | TGTCAACTTTCCTTCCA |
| -80 | 5.5 | TGTTATATTTTCTAACA | ||
| Bacillus licheniformis DSM 13 | BLi01490 | -124 | 3.8 | TGTAAACTTTTCTTCCG |
| -81 | 5.6 | TGTTAGATTTTCTGACA | ||
| Anoxybacillus flavithermus WK1 | Aflv_1544 | -113 | 4.9 | TGTTACTTTTTATAACA |
| -82 | 4.9 | TGTTACTTTTTATAACA | ||
| -27 | 5.4 | TGTTATAAAATATGACA | ||
| Geobacillus kaustophilus HTA426 | GK1860 | -86 | 3.9 | TGTTAATTTTATTTACA |
| -33 | 4.6 | CGTTAGAAAATATAACG | ||
| Bacillus halodurans C-125 | BH1494 | -110 | 5.5 | TGTAAGAAAATCTAACA |
| Bacillus clausii KSM-K16 | ABC1760 | -99 | 5.5 | TGTTAGATTTTCTTACA |
| -57 | 5 | TGTGATATATTGTTACA | ||
| Oceanobacillus iheyensis HTE831 | OB1650 | -80 | 5.1 | TGTTAGAAATACTAACA |
| -57 | 4.3 | TGACATATAAGCTGACG | ||
| Paenibacillus sp. JDR-2 | Pjdr2_5154 | -302 | 5.7 | TGTTAGATAATCTAACA |
| -41 | 5 | TGTTAGAAAACATTACA | ||
|
Position: -130
Score: 5.5 Sequence: TGTCATATTTTCTAACA
Locus tag: BsubsS_010100007367
|
||||
| BsubsS_010100007367 | -130 | 5.5 | TGTCATATTTTCTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ykzB | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU13320 | -130 | 5.5 | TGTCATATTTTCTAACA |
| -87 | 3.9 | CGGAAGAAAAATTAACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_013140 | -130 | 4.8 | TGTCAGGTTTTCTGACG |
| -87 | 4.1 | CGGCAGAAAAATTGACA | ||
| Anoxybacillus flavithermus WK1 | Aflv_1546 | -172 | 5.4 | TGTCATATTTTATAACA |
| -117 | 4.9 | TGTTATAAAAAGTAACA | ||
| -86 | 4.9 | TGTTATAAAAAGTAACA | ||
| Geobacillus kaustophilus HTA426 | GK1862 | -176 | 4.6 | CGTTATATTTTCTAACG |
| -123 | 3.9 | TGTAAATAAAATTAACA | ||
|
Position: -59
Score: 5 Sequence: TGACACATAATATAACA
Locus tag: BsubsS_010100009577
|
||||
| BsubsS_010100009577 | -59 | 5 | TGACACATAATATAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnR | ||||
| Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17450 | -82 | 4.3 | TGTTAAGAATCCTTACA |
| -59 | 5 | TGACACATAATATAACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_017250 | -82 | 4.3 | TGTTAAGATTCCTTACA |
| -59 | 4.9 | TGACACAAAATATAACA | ||
| Bacillus pumilus SAFR-032 | BPUM_1636 | -82 | 4.4 | TGTTAATATTCCTAACA |
| -59 | 5.1 | TGACATATAATATAACA | ||
| -54 | 4.2 | TATAATATAACATGACA | ||
| Bacillus licheniformis DSM 13 | BLi01992 | -81 | 4.2 | TGTAAAGAATCCTTACA |
| -58 | 5 | TGACACATTATATAACA | ||
| Anoxybacillus flavithermus WK1 | Aflv_1508 | -82 | 4.7 | TGTGATAAAATGTAACG |
| -59 | 4.3 | TGACATATAAGTTAACA | ||
|
Position: -240
Score: 3.9 Sequence: GGGAAGAAATGATTACA
Position: -61
Score: 5.2 Sequence: TGTTAAAAAATCTAACA
Locus tag: BsubsS_010100009957
|
||||
| BsubsS_010100009957 | -240 | 3.9 | GGGAAGAAATGATTACA | |
| -61 | 5.2 | TGTTAAAAAATCTAACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: alsT | ||||
| Ortholog function: Sodium/alanine symporter family protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU18120 | -240 | 3.9 | GGGAAGAAATGATTACA |
| -61 | 5.2 | TGTTAAAAAATCTAACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_017940 | -64 | 4.8 | TGTTAAAAGATCTAACA |
| Bacillus licheniformis DSM 13 | BLi02069 | -51 | 4.8 | TGTTAGAAAACTTAACA |
| Bacillus halodurans C-125 | BH1772 | -191 | 3.9 | TGTCATTTAATGCATCA |
|
Position: -51
Score: 5 Sequence: TGTTAGATTTTATGACC
Locus tag: BsubsS_010100010137
|
||||
| BsubsS_010100010137 | -51 | 5 | TGTTAGATTTTATGACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltA | ||||
| Ortholog function: Glutamate synthase [NADPH] large chain (EC 1.4.1.13) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU18450 | -51 | 5 | TGTTAGATTTTATGACC |
| Bacillus amyloliquefaciens FZB42 | RBAM_018620 | -52 | 5 | TGTCAGATTTTATGACC |
| Bacillus pumilus SAFR-032 | BPUM_1814 | -54 | 4.6 | TGTGAGATTTTATTACT |
| Bacillus licheniformis DSM 13 | BLi02162 | -54 | 4.9 | TGTAAGATTTTATGACC |
|
Position: -112
Score: 5 Sequence: GGTCATAAAATCTAACA
Locus tag: BsubsS_010100010142
|
||||
| BsubsS_010100010142 | -112 | 5 | GGTCATAAAATCTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gltC | ||||
| Ortholog function: Transcriptional regulator of glutamate biosynthesis (LysR family) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU18460 | -112 | 5 | GGTCATAAAATCTAACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_018630 | -110 | 5 | GGTCATAAAATCTGACA |
| Bacillus pumilus SAFR-032 | BPUM_1815 | -116 | 4.6 | AGTAATAAAATCTCACA |
| Bacillus licheniformis DSM 13 | BLi02163 | -111 | 4.9 | GGTCATAAAATCTTACA |
|
Position: -61
Score: 4.8 Sequence: TGTGATCTTTTCTTACA
Locus tag: BsubsS_010100010782
|
||||
| BsubsS_010100010782 | -61 | 4.8 | TGTGATCTTTTCTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhjC | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU19579 | -61 | 4.8 | TGTGATCTTTTCTTACA |
| Bacillus pumilus SAFR-032 | BPUM_1877 | -59 | 4.9 | TGTGATCTAATCTGACA |
| 1 | 4 | TGCAAGGAAATTTGACA | ||
| Bacillus licheniformis DSM 13 | BLi02277 | -62 | 4.9 | TGTGATTAAATCTGACA |
|
Position: -138
Score: 4.3 Sequence: TGTGTCATTATCTCACA
Locus tag: BsubsS_010100013797
|
||||
| BsubsS_010100013797 | -138 | 4.3 | TGTGTCATTATCTCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yqzL | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU25289 | -135 | 4.3 | TGTGTCATTATCTCACA |
| Bacillus pumilus SAFR-032 | BPUM_2261 | -134 | 5.5 | TGTCATAAAATCTGACA |
| Bacillus halodurans C-125 | BH1368 | -216 | 4.4 | TGCAAGAAAATGTCACA |
|
Position: -28
Score: 4 Sequence: GGTCAAATTTTCTGATA
Locus tag: BsubsS_010100014952
|
||||
| BsubsS_010100014952 | -28 | 4 | GGTCAAATTTTCTGATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnQ | ||||
| Ortholog function: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU27430 | -28 | 4 | GGTCAAATTTTCTGATA |
| Bacillus amyloliquefaciens FZB42 | RBAM_024530 | -123 | 3.5 | TATCAGAAATTACGAAA |
| Bacillus pumilus SAFR-032 | BPUM_2382 | -93 | 3.8 | TGTTAAAAATGAATACA |
| Bacillus clausii KSM-K16 | ABC0770 | -8 | 3.4 | GGACAGCAATGATCACA |
| Paenibacillus sp. JDR-2 | Pjdr2_2874 | -63 | 4.7 | TGTTATCTAACCTAACA |
|
Position: -96
Score: 4.9 Sequence: GGTCATATAATGTGACA
Locus tag: BsubsS_010100015172
|
||||
| BsubsS_010100015172 | -96 | 4.9 | GGTCATATAATGTGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yrbD | ||||
| Ortholog function: Sodium/proton-dependent alanine transporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU27810 | -96 | 4.9 | GGTCATATAATGTGACA |
|
Position: -141
Score: 5.1 Sequence: TGGAAGATTTTATAACA
Locus tag: BsubsS_010100015432
|
||||
| BsubsS_010100015432 | -141 | 5.1 | TGGAAGATTTTATAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ysnD | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28320 | -141 | 5.1 | TGGAAGATTTTATAACA |
| -97 | 4 | TGACAGATCATCTTGCA | ||
|
Position: -63
Score: 4.6 Sequence: CGTGAAAAAATCTAACA
Locus tag: BsubsS_010100016507
|
||||
| BsubsS_010100016507 | -63 | 4.6 | CGTGAAAAAATCTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yttA | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU30360 | -63 | 4.6 | CGTGAAAAAATCTAACA |
| 19 | 3.7 | TCTTAGGTTTTCTGGCA | ||
|
Position: -78
Score: 4.4 Sequence: TGTCACATGATCTGACT
Locus tag: BsubsS_010100017451
|
||||
| BsubsS_010100017451 | -78 | 4.4 | TGTCACATGATCTGACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yuiA | ||||
| Ortholog function: Uncharacterized conserved protein contain two CXXC motifs | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32090 | -78 | 4.4 | TGTCACATGATCTGACT |
| Bacillus amyloliquefaciens FZB42 | RBAM_029140 | -76 | 4.8 | TGTTACATATTCTGACT |
| Bacillus halodurans C-125 | BH3406 | -86 | 4.1 | TGTGAGAATACCTCGCA |
|
Position: -43
Score: 4.6 Sequence: TGGTATAATTAATAACA
Locus tag: BsubsS_010100017461
|
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| BsubsS_010100017461 | -43 | 4.6 | TGGTATAATTAATAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yumC | ||||
| Ortholog function: Thioredoxin reductase (EC 1.8.1.9) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32110 | -43 | 4.6 | TGGTATAATTAATAACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_029160 | -229 | 3.9 | TGAAATGAAATATAAAA |
| -42 | 4.9 | TGTTATAATTAATAACA | ||
| Bacillus halodurans C-125 | BH3408 | -277 | 4.3 | TGGCAAAAAAAGTGACA |
| -125 | 4.3 | TGACAGATTTATTTACA | ||
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Position: -51
Score: 5.1 Sequence: TGTTACATAAACTGACA
Locus tag: BsubsS_010100017611
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| BsubsS_010100017611 | -51 | 5.1 | TGTTACATAAACTGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pucH | ||||
| Ortholog function: Allantoinase (EC 3.5.2.5) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32410 | -51 | 5.1 | TGTTACATAAACTGACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_029500 | -50 | 4.9 | TGTGATAAAAACTGACA |
| Bacillus halodurans C-125 | BH2309 | -260 | 4.5 | TGTCATAAAGCCTAACA |
| -71 | 4.2 | TATCAGAAAATATAAAA | ||
| Bacillus clausii KSM-K16 | ABC3732 | -173 | 4.2 | TGTAAACAATCCTAACA |
| Bacillus clausii KSM-K16 | ABC3732 | -173 | 4.2 | TGTAAACAATCCTAACA |
| Paenibacillus sp. JDR-2 | Pjdr2_3313 | -179 | 4.1 | TGTGATCTATTGTTACG |
| -96 | 4.3 | TGTAAGATATATTGACG | ||
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Position: -140
Score: 5.1 Sequence: TGTCAGTTTATGTAACA
Locus tag: BsubsS_010100017616
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| BsubsS_010100017616 | -140 | 5.1 | TGTCAGTTTATGTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pucR | ||||
| Ortholog function: Transcriptional regulator of the purine degradation operon, PucR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32420 | -140 | 5.1 | TGTCAGTTTATGTAACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_029510 | -146 | 4.9 | TGTCAGTTTTTATCACA |
| Bacillus pumilus SAFR-032 | BPUM_2903 | -142 | 4.4 | TGTCATGTTAGTTGACA |
| Bacillus licheniformis DSM 13 | BLi03436 | -138 | 4.6 | TGTTATATTTCTTTACA |
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Position: -140
Score: 5.3 Sequence: TGTTACATTTTCTTACA
Locus tag: BsubsS_010100017621
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| BsubsS_010100017621 | -140 | 5.3 | TGTTACATTTTCTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pucJ | ||||
| Ortholog function: Xanthine permease | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32430 | -140 | 5.3 | TGTTACATTTTCTTACA |
| -34 | 3.9 | TGTTACTAAAGTTCACA | ||
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Position: -125
Score: 4.7 Sequence: TGTTTCATTTTCTGACA
Locus tag: BsubsS_010100017666
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| BsubsS_010100017666 | -125 | 4.7 | TGTTTCATTTTCTGACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pucA | ||||
| Ortholog function: Xanthine dehydrogenase subunit A | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32510 | -125 | 4.7 | TGTTTCATTTTCTGACA |
| -101 | 4 | AGTCATTTTTTCTTCCA | ||
| Bacillus clausii KSM-K16 | ABC3744 | -270 | 4.5 | TGTGAAAAAACCTTACA |
| -141 | 4 | GGGGAGAAGATCTAACA | ||
| Paenibacillus sp. JDR-2 | Pjdr2_3325 | -55 | 4.9 | TGTTATATAAAGTAACA |
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Position: -39
Score: 4.8 Sequence: CGTCAGAAAATTTAACA
Locus tag: BsubsS_010100018201
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| BsubsS_010100018201 | -39 | 4.8 | CGTCAGAAAATTTAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yvgT | ||||
| Ortholog function: Hypothetical membrane protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU33460 | -39 | 4.8 | CGTCAGAAAATTTAACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_030630 | -37 | 4.8 | CGTCAGAAAATTTAACA |
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Position: -98
Score: 4.4 Sequence: GGGAAGATTATGTTACA
Locus tag: BsubsS_010100019451
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| BsubsS_010100019451 | -98 | 4.4 | GGGAAGATTATGTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: capB | ||||
| Ortholog function: Poly-gamma-glutamate synthase subunit (EC 6.3.2.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU35900 | -98 | 4.4 | GGGAAGATTATGTTACA |
| Bacillus pumilus SAFR-032 | BPUM_3259 | -106 | 4.9 | TGAAAGATTATGTTACA |
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Position: -83
Score: 4 Sequence: CGTCAGTTTTTCTGCCG
Locus tag: BsubsS_010100019551
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| BsubsS_010100019551 | -83 | 4 | CGTCAGTTTTTCTGCCG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ywrD | ||||
| Ortholog function: Gamma-glutamyltranspeptidase (EC 2.3.2.2) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU36100 | -83 | 4 | CGTCAGTTTTTCTGCCG |
| Bacillus amyloliquefaciens FZB42 | RBAM_033270 | -78 | 4.9 | TGTGAGATTTTCTTTCA |
| Bacillus licheniformis DSM 13 | BLi03850 | -167 | 3.6 | TTTTGTAAATTGTATCA |
| -91 | 3.8 | CGTTAGTTTTTCTTCCC | ||
| Paenibacillus sp. JDR-2 | Pjdr2_5903 | -34 | 3.6 | GGTTAGTAAACCTGACT |
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Position: -78
Score: 4.3 Sequence: AGTTATATTAAGTGACA
Position: -56
Score: 4.3 Sequence: TGTCAAAAAACATAACG
Locus tag: BsubsS_010100019746
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| BsubsS_010100019746 | -78 | 4.3 | AGTTATATTAAGTGACA | |
| -56 | 4.3 | TGTCAAAAAACATAACG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pucI | ||||
| Ortholog function: Allantoin permease | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU36470 | -78 | 4.3 | AGTTATATTAAGTGACA |
| -66 | 3.7 | TGACATCTAATGTCAAA | ||
| -56 | 4.3 | TGTCAAAAAACATAACG | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_033650 | -32 | 3.9 | TGTAAGGAAAACGTACA |
|
Position: -102
Score: 5.2 Sequence: TGTCAGGAAATCTTACA
Locus tag: BsubsS_010100019766
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| BsubsS_010100019766 | -102 | 5.2 | TGTCAGGAAATCTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nrgA | ||||
| Ortholog function: Ammonium transporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU36510 | -102 | 5.2 | TGTCAGGAAATCTTACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_033680 | -98 | 5.2 | TGTCAGATAACCTTACA |
| Bacillus licheniformis DSM 13 | BLi03888 | -103 | 5.2 | TGTAAGGAAATCTGACA |
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Position: -154
Score: 4.7 Sequence: TGTCAGAAAATCTGCAA
Locus tag: BsubsS_010100019986
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| BsubsS_010100019986 | -154 | 4.7 | TGTCAGAAAATCTGCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpiB | ||||
| Ortholog function: Ribose 5-phosphate isomerase B (EC 5.3.1.6) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU36920 | -154 | 4.7 | TGTCAGAAAATCTGCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_034080 | -131 | 4.7 | TGTCAGAAAATCTGCAA |
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Position: -117
Score: 3.6 Sequence: TGTAACTATAAATGATA
Position: -105
Score: 3.4 Sequence: TGATAATAATTATAAGA
Position: -31
Score: 4.1 Sequence: TCGTACATTTTATTACA
Locus tag: BsubsS_010100020976
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| BsubsS_010100020976 | -117 | 3.6 | TGTAACTATAAATGATA | |
| -105 | 3.4 | TGATAATAATTATAAGA | ||
| -31 | 4.1 | TCGTACATTTTATTACA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yxkC | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU38850 | -117 | 3.6 | TGTAACTATAAATGATA |
| -31 | 4.1 | TCGTACATTTTATTACA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_036070 | -68 | 3.3 | CTATAGGTTATTTTACA |
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Position: -66
Score: 4.6 Sequence: TGTGACATCTTCTTACA
Locus tag: BsubsS_010100021856
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| BsubsS_010100021856 | -66 | 4.6 | TGTGACATCTTCTTACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yycC | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU40470 | -66 | 4.6 | TGTGACATCTTCTTACA |
| Bacillus amyloliquefaciens FZB42 | RBAM_037500 | -64 | 4.1 | TGTCATATCCTCTTACG |