Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CsoR regulog to Bacillus subtilis subsp. subtilis str. JH642

Reference regulog properties
Source regulog: CsoR - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus subtilis subsp. subtilis str. JH642
Orthologous TF(s) BsubsJ_010100018080
Regulated genes 3
Built upon 25 sites [see more]
Predicted regulatory interactions in Bacillus subtilis subsp. subtilis str. JH642
Locus tag Position Score Sequence
Position: -43
Score: 5.2
Sequence: ATACCGTTCGGGGGTAT
Locus tag: BsubsJ_010100003183
BsubsJ_010100003183 -43 5.2 ATACCGTTCGGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydhK
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU05790 -43 5.2 ATACCGTTCGGGGGTAT
Bacillus clausii KSM-K16 ABC3339 -51 6 ATACCCCACTAGGGTAT
Position: -34
Score: 5.5
Sequence: ATACCCCCCAGGTGTAT
Locus tag: BsubsJ_010100018070
BsubsJ_010100018070 -34 5.5 ATACCCCCCAGGTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: copA
Ortholog function: Copper-translocating P-type ATPase (EC 3.6.3.4)
Bacillus subtilis subsp. subtilis str. 168 BSU33500 -34 5.5 ATACCCCCCAGGTGTAT
Bacillus amyloliquefaciens FZB42 RBAM_030680 -27 5.4 ATACCCCCTGGGGGTTT
Bacillus pumilus SAFR-032 BPUM_3021 -34 5.6 ATACCCCCATGGTGTAT
Position: -57
Score: 5.9
Sequence: ATACCCTACGGGGGTAT
Locus tag: BsubsJ_010100018075
BsubsJ_010100018075 -57 5.9 ATACCCTACGGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: copZ
Ortholog function: Copper insertion chaperone and transporter component
Bacillus subtilis subsp. subtilis str. 168 BSU33510 -57 5.9 ATACCCTACGGGGGTAT
Bacillus amyloliquefaciens FZB42 RBAM_030690 -44 5.9 ATACCCTACAGGGGTAT
Bacillus pumilus SAFR-032 BPUM_3022 -55 5.9 ATACCCTACTAGGGTAT
Bacillus licheniformis DSM 13 BLi03554 -65 5.9 ATACCCTACAGGGGTAT
Bacillus cereus ATCC 14579 BC3731 -71 5.1 TTACCTTAGGGGGGTAT
Bacillus halodurans C-125 BH0556 -54 4.9 ATACAATAGGGGGGTAT
Bacillus clausii KSM-K16 ABC2443 -57 5.1 ATACCTGACGGGGGTAT
© 2009-2020 RegPrecise