Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YwbI regulog to Bacillus subtilis subsp. subtilis str. JH642

Reference regulog properties
Source regulog: YwbI - Bacillales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode:
Biological process: Cell wall metabolism
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus subtilis subsp. subtilis str. JH642
Orthologous TF(s) BsubsJ_010100020545
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Bacillus subtilis subsp. subtilis str. JH642
Locus tag Position Score Sequence
Position: -62
Score: 5.7
Sequence: ATAGGTAAAATATATAT
Locus tag: BsubsJ_010100020545
BsubsJ_010100020545 -62 5.7 ATAGGTAAAATATATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ywbI
Ortholog function: Transcriptional regulator, LysR family
Bacillus subtilis subsp. subtilis str. 168 BSU38310 -62 5.7 ATAGGTAAAATATATAT
Bacillus amyloliquefaciens FZB42 RBAM_035570 -63 6 ATAGGTAAAATACATAT
Position: -60
Score: 5.7
Sequence: ATATATATTTTACCTAT
Locus tag: BsubsJ_010100020550
BsubsJ_010100020550 -60 5.7 ATATATATTTTACCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cidA
Ortholog function: Holin-like protein CidA
Bacillus subtilis subsp. subtilis str. 168 BSU38320 -60 5.7 ATATATATTTTACCTAT
Bacillus amyloliquefaciens FZB42 RBAM_035580 -60 6 ATATGTATTTTACCTAT
Bacillus pumilus SAFR-032 BPUM_3486 -120 6 ATATGTATTTTACCTAT
Bacillus licheniformis DSM 13 BLi04057 -62 6 ATATGTATTTTACCTAT
Paenibacillus sp. JDR-2 Pjdr2_1918 -60 5.6 AAATGTATTTTACCTAT