Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SinR regulog to Bacillus subtilis subsp. subtilis str. JH642

Reference regulog properties
Source regulog: SinR - Bacillales
Regulator type: Transcription factor
Regulator family: XRE
Regulation mode: repressor
Biological process: Biofilm formation
Effector: SinI, antirepressor protein
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus subtilis subsp. subtilis str. JH642
Orthologous TF(s) BsubsJ_010100013328
Regulated genes 3
Built upon 15 sites [see more]
Predicted regulatory interactions in Bacillus subtilis subsp. subtilis str. JH642
Locus tag Position Score Sequence
Position: -57
Score: 6.1
Sequence: GTTCTTTAAAGAGAAC
Locus tag: BsubsJ_010100013343
BsubsJ_010100013343 -57 6.1 GTTCTTTAAAGAGAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqxM
Ortholog function: Lipoprotein for biofilm formation
Bacillus amyloliquefaciens FZB42 RBAM_022960 -55 6.1 GTTCTTTAAAGAGAAC
Bacillus halodurans C-125 BH2131 -131 5.7 GTTCTTTATAAAAAAC
Bacillus licheniformis DSM 13 BLi02639 -55 5.9 GTTCTTTAAAACGAAC
Bacillus pumilus SAFR-032 BPUM_2196 -41 6.3 GTTCTTTTTAAAGAAC
Bacillus subtilis subsp. subtilis str. 168 BSU24640 -57 6.1 GTTCTTTAAAGAGAAC
Position: -127
Score: 6
Sequence: GTTCTCTAAAGAGAAC
Locus tag: BsubsJ_010100018505
BsubsJ_010100018505 -127 6 GTTCTCTAAAGAGAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: epsA
Ortholog function: Possible capsular polysaccharide biosynthesis protein
Bacillus amyloliquefaciens FZB42 RBAM_031670 -125 6.3 GTTCTTTAAAAAGAAC
Bacillus licheniformis DSM 13 BLi03694 -106 6.1 GTTCTCTAAAAAGAAC
Bacillus pumilus SAFR-032 BPUM_3083 -125 6.3 GTTCTTTAAAAAGAAC
Bacillus subtilis subsp. subtilis str. 168 BSU34370 -127 6 GTTCTCTAAAGAGAAC
Position: -134
Score: 6
Sequence: GTTCTCTTTAGAGAAC
Locus tag: BsubsJ_010100018510
BsubsJ_010100018510 -134 6 GTTCTCTTTAGAGAAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: slr
Ortholog function: Transcriptional repressor of cell separation and motility/antirepressor of SinR
Bacillus subtilis subsp. subtilis str. 168 BSU34380 -134 6 GTTCTCTTTAGAGAAC
© 2009-2020 RegPrecise