Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YrkD regulog to Geobacillus sp. WCH70

Reference regulog properties
Source regulog: YrkD - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. WCH70
Orthologous TF(s) GWCH70_0560
Regulated genes 3
Built upon 39 sites [see more]
Predicted regulatory interactions in Geobacillus sp. WCH70
Locus tag Position Score Sequence
Position: -73
Score: 5.5
Sequence: ATACCCATACATGTAT
Locus tag: GWCH70_0555
GWCH70_0555 -73 5.5 ATACCCATACATGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: GK2076
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Geobacillus kaustophilus HTA426 GK2076 -103 4.9 ATACATATACACGTAT
-97 5.2 ATACACGTATATGTAT
Position: -44
Score: 5.4
Sequence: ATACCTATAGGGGTAA
Locus tag: GWCH70_0561
GWCH70_0561 -44 5.4 ATACCTATAGGGGTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkI
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2345 -68 5 ATACTCATAGAGGTAA
-22 5.5 ATACCCTTATGAGTAT
Geobacillus kaustophilus HTA426 GK2070 -52 5.6 ATACCCATAGGGGTAA
Position: -40
Score: 5.2
Sequence: ATACCTATATAAGTAT
Locus tag: GWCH70_0562
GWCH70_0562 -40 5.2 ATACCTATATAAGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkE
Ortholog function: Putative sulfur reduction protein
Bacillus amyloliquefaciens FZB42 RBAM_005430 -104 5.7 ATACCCCTACCGGTAT
-40 5.2 ATACCCCCAGGGGTAA
Bacillus cereus ATCC 14579 BC0798 -32 5.4 ATACCCCTATAGGTAA
Bacillus licheniformis DSM 13 BLi02794 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Bacillus pumilus SAFR-032 BPUM_0190 -75 5.6 ATACCCTTACCGGTAT
-35 5 ATACCCCCATAGGTAA
Bacillus subtilis subsp. subtilis str. 168 BSU26540 -101 4.6 ATACCCCCTATGGTAT
-34 5.2 ATACCCGCAGGGGTAA
Geobacillus kaustophilus HTA426 GK2069 -69 5.5 ATACCCATATATGTAT
Oceanobacillus iheyensis HTE831 OB2652 -116 5.9 ATACCTGTACGGGTAT
-45 5.4 ATACCTATGCGGGTAT
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