Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TnrA regulog to Geobacillus sp. WCH70

Reference regulog properties
Source regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. WCH70
Orthologous TF(s) GWCH70_1499
Regulated genes 16
Built upon 304 sites [see more]
Predicted regulatory interactions in Geobacillus sp. WCH70
Locus tag Position Score Sequence
Position: -33
Score: 5
Sequence: TGTTAGAAGATATAACA
Locus tag: GWCH70_1499
GWCH70_1499 -33 5 TGTTAGAAGATATAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU13310 -124 3.9 TGTTAATTTTTCTTCCG
-81 5.5 TGTTAGAAAATATGACA
Bacillus amyloliquefaciens FZB42 RBAM_013130 -124 4.1 TGTCAATTTTTCTGCCG
-81 4.8 CGTCAGAAAACCTGACA
Bacillus pumilus SAFR-032 BPUM_1230 -121 4 TGTCAACTTTCCTTCCA
-80 5.5 TGTTATATTTTCTAACA
Bacillus licheniformis DSM 13 BLi01490 -124 3.8 TGTAAACTTTTCTTCCG
-81 5.6 TGTTAGATTTTCTGACA
Anoxybacillus flavithermus WK1 Aflv_1544 -113 4.9 TGTTACTTTTTATAACA
-82 4.9 TGTTACTTTTTATAACA
-27 5.4 TGTTATAAAATATGACA
Geobacillus kaustophilus HTA426 GK1860 -86 3.9 TGTTAATTTTATTTACA
-33 4.6 CGTTAGAAAATATAACG
Bacillus halodurans C-125 BH1494 -110 5.5 TGTAAGAAAATCTAACA
Bacillus clausii KSM-K16 ABC1760 -99 5.5 TGTTAGATTTTCTTACA
-57 5 TGTGATATATTGTTACA
Oceanobacillus iheyensis HTE831 OB1650 -80 5.1 TGTTAGAAATACTAACA
-57 4.3 TGACATATAAGCTGACG
Paenibacillus sp. JDR-2 Pjdr2_5154 -302 5.7 TGTTAGATAATCTAACA
-41 5 TGTTAGAAAACATTACA
Position: -31
Score: 3.6
Sequence: CGTAACATAATCAAAAA
Locus tag: GWCH70_3043
GWCH70_3043 -31 3.6 CGTAACATAATCAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: degU
Ortholog function: Transcriptional regulator essential for degradative enzyme expression and competence regulation, OmpR family
Bacillus subtilis subsp. subtilis str. 168 BSU35490 -159 3.7 TGGAAGGAACGATGACA
Bacillus pumilus SAFR-032 BPUM_3198 -221 3.4 TGTGAAAACAAATAAAA
-159 3.8 TGGAAGGTAAAATGACC
Oceanobacillus iheyensis HTE831 OB2519 -37 3.6 AGAAAGAATTACTATCA
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