Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RmgR regulog to Bacillus subtilis subsp. subtilis str. 168

Reference regulog properties
Source regulog: RmgR - Bacillales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus subtilis subsp. subtilis str. 168
Orthologous TF(s) BSU30150
Regulated genes 2
Built upon 10 sites [see more]
Predicted regulatory interactions in Bacillus subtilis subsp. subtilis str. 168
Locus tag Position Score Sequence
Position: -154
Score: 7.7
Sequence: TCATTT-(13)-TCTTTT
Position: -76
Score: 5.7
Sequence: TCATAT-(12)-ACTTTT
Locus tag: BSU30135
BSU30135 -154 7.7 TCATTT-(13)-TCTTTT
-76 5.7 TCATAT-(12)-ACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yteP
Ortholog function: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 1
Bacillus subtilis subsp. subtilis str. 168 BSU30135 -154 7.7 TCATTT-(13)-TCTTTT
Bacillus pumilus SAFR-032 BPUM_2660 -223 6.7 CCATTT-(12)-TCTTTT
-155 8.2 TCATTT-(13)-TCATTT
Bacillus licheniformis DSM 13 BLi03166 -139 8.2 TCATTT-(13)-TCATTT
Bacillus halodurans C-125 BH0484 -155 7.7 TCATTA-(13)-TCATTT
Bacillus clausii KSM-K16 ABC1145 -174 5.3 TCATTT-(13)-gCAaaT
Oceanobacillus iheyensis HTE831 OB2090 -169 6.7 TCAATT-(12)-TCATTA
Paenibacillus sp. JDR-2 Pjdr2_1803 -141 6.7 TCAATT-(13)-TCATTA
Position: -206
Score: 7.7
Sequence: TCATTT-(13)-TCTTTT
Position: 25
Score: 5.3
Sequence: TGATTT-(12)-TGATGT
Locus tag: BSU30170
BSU30170 -206 7.7 TCATTT-(13)-TCTTTT
25 5.3 TGATTT-(12)-TGATGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytcP
Ortholog function: Predicted unsaturated rhamnogalacturonyl ABC transporter, permease component 2
Bacillus subtilis subsp. subtilis str. 168 BSU30170 -206 7.7 TCATTT-(13)-TCTTTT
Bacillus licheniformis DSM 13 BLi03169 -208 6.7 TCATCT-(13)-TCTTTT
Bacillus clausii KSM-K16 ABC1146 -174 5.3 TCATTT-(13)-gCAaaT
Oceanobacillus iheyensis HTE831 OB2089 -169 6.7 TCAATT-(12)-TCATTA
Paenibacillus sp. JDR-2 Pjdr2_1804 -141 6.7 TCAATT-(13)-TCATTA
© 2009-2020 RegPrecise