Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LexA regulog to Bacillus subtilis subsp. subtilis str. 168

Reference regulog properties
Source regulog: LexA - Bacillales
Regulator type: Transcription factor
Regulator family: LexA
Regulation mode: repressor
Biological process: SOS response
Effector: DNA damage
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus subtilis subsp. subtilis str. 168
Orthologous TF(s) BSU17850
Regulated genes 24
Built upon 206 sites [see more]
Predicted regulatory interactions in Bacillus subtilis subsp. subtilis str. 168
Locus tag Position Score Sequence
Position: -140
Score: 4.6
Sequence: CAGAACATTTGTTCCT
Locus tag: BSU01520
BSU01520 -140 4.6 CAGAACATTTGTTCCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybaK
Ortholog function: Putative alkylated deoxynucleotide triphosphohydrolase
Bacillus subtilis subsp. subtilis str. 168 BSU01520 -140 4.6 CAGAACATTTGTTCCT
Position: -56
Score: 4.8
Sequence: AAGAACTCATGTTCGT
Locus tag: BSU05630
BSU05630 -56 4.8 AAGAACTCATGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dinB
Ortholog function: Nuclease inhibitor
Bacillus subtilis subsp. subtilis str. 168 BSU05630 -56 4.8 AAGAACTCATGTTCGT
Bacillus amyloliquefaciens FZB42 RBAM_037680 -38 4.1 AGGAACGTACGTTCTG
Position: -36
Score: 4.4
Sequence: TAGAACGTATGTTTTG
Locus tag: BSU06610
BSU06610 -36 4.4 TAGAACGTATGTTTTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: pcrA
Ortholog function: ATP-dependent DNA helicase
Bacillus subtilis subsp. subtilis str. 168 BSU06610 -36 4.4 TAGAACGTATGTTTTG
Bacillus amyloliquefaciens FZB42 RBAM_007010 -32 5.2 TAGAACATATGTTTGA
Bacillus pumilus SAFR-032 BPUM_0625 -32 5.2 TAGAACATAAGTTCGA
Bacillus licheniformis DSM 13 BLi00715 -33 5.2 TAGAACATATGTTTGA
Anoxybacillus flavithermus WK1 Aflv_0246 -13 4.5 GAGAACATATGTTTTG
Geobacillus kaustophilus HTA426 GK0275 -31 4.8 TAGAACATATGTTTTG
Bacillus halodurans C-125 BH0648 -8 4.6 AAGAACAAGTGTTTGG
Position: -35
Score: 4.3
Sequence: TAGAACAAACGTTCCC
Locus tag: BSU10470
BSU10470 -35 4.3 TAGAACAAACGTTCCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhjD
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU10470 -35 4.3 TAGAACAAACGTTCCC
Bacillus amyloliquefaciens FZB42 RBAM_010690 -40 4.7 AAGAACAAAGGTTCTC
Paenibacillus sp. JDR-2 Pjdr2_1533 -42 4.8 TCGAACGTTTGTTCGC
Position: -30
Score: 4.9
Sequence: CAGAACAAACGTTCGA
Locus tag: BSU12500
BSU12500 -30 4.9 CAGAACAAACGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: xkdA
Ortholog function: Phage-like element PBSX protein xkdA
Bacillus subtilis subsp. subtilis str. 168 BSU12500 -30 4.9 CAGAACAAACGTTCGA
Position: -125
Score: 5
Sequence: ACGAACGTATGTTTGT
Locus tag: BSU13800
BSU13800 -125 5 ACGAACGTATGTTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ykvR
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU13800 -125 5 ACGAACGTATGTTTGT
Bacillus amyloliquefaciens FZB42 RBAM_013560 -111 4.2 GGGAACGTATGTTTGT
Position: -87
Score: 4.7
Sequence: CCGAATATGCGTTCGC
Locus tag: BSU16940
BSU16940 -87 4.7 CCGAATATGCGTTCGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: recA
Ortholog function: Recombination protein A
Bacillus subtilis subsp. subtilis str. 168 BSU16940 -87 4.7 CCGAATATGCGTTCGC
Bacillus amyloliquefaciens FZB42 RBAM_016780 -86 4.7 CCGAATATGCGTTCGC
Bacillus pumilus SAFR-032 BPUM_1598 -88 5.2 TCGAATATGTGTTCGT
Bacillus licheniformis DSM 13 BLi01918 -259 4.3 TCGAATTTCAGTTCGC
-86 4.8 TCGAATATGCGTTCGC
Anoxybacillus flavithermus WK1 Aflv_1530 34 4.7 ACGAACATCTATTCGT
Geobacillus kaustophilus HTA426 GK1295 -85 4.4 ACGAATGGACGTTCGT
Bacillus cereus ATCC 14579 BC3779 -85 5.1 TCGAATAAATGTTCGA
Bacillus halodurans C-125 BH2383 -343 4 AAAAATTCACGTTTGT
-121 4.9 GCGAATAAATGTTCGT
Bacillus clausii KSM-K16 ABC2199 -132 5.3 ACGAATAAATGTTCGT
Oceanobacillus iheyensis HTE831 OB1624 -82 4.4 AAGAACATCCATTCGT
Paenibacillus sp. JDR-2 Pjdr2_3379 -297 3.9 GCGAACAATAATTTGT
-84 4.9 ACGAATGTATGTTCGA
Position: -180
Score: 5.1
Sequence: ACGAACAAACGTTCTT
Locus tag: BSU17260
BSU17260 -180 5.1 ACGAACAAACGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aprX
Ortholog function: Alkaline serine protease
Bacillus subtilis subsp. subtilis str. 168 BSU17260 -180 5.1 ACGAACAAACGTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_017070 -146 4.5 ACGAACAAAAGTTCCA
Position: -73
Score: 5.1
Sequence: TCGAACCTATGTTTGT
Locus tag: BSU17850
BSU17850 -73 5.1 TCGAACCTATGTTTGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lexA
Ortholog function: SOS-response transcriptional repressor
Bacillus subtilis subsp. subtilis str. 168 BSU17850 -139 4.2 AGGAATGTTTGTTCGC
-102 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus amyloliquefaciens FZB42 RBAM_017650 -140 4.5 AAGAATGTTTGTTCGC
-103 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus pumilus SAFR-032 BPUM_1686 -142 4.6 TAGAATGTGTGTTCGT
-103 4.4 ACGAACAAACGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Bacillus licheniformis DSM 13 BLi02032 -346 4.1 ATGAATTTGTGTTTGT
-141 4.2 CAGAATGTTTGTTCGG
-103 4.6 ACGAACAAATGTTTCT
-73 5.1 TCGAACCTATGTTTGT
Anoxybacillus flavithermus WK1 Aflv_1506 -110 5.2 TAGAACATTTGTTTGT
-82 4.8 GAGAACTTTTGTTCGT
-53 5.2 TCGAACTTATGTTTGT
Geobacillus kaustophilus HTA426 GK1328 -136 4.5 TAGAATGTTTGTTCGC
-103 4.9 AGGAACATTTGTTTGT
-74 5.1 TCGAACCTATGTTTGT
Bacillus cereus ATCC 14579 BC3690 -70 5.2 TCGAACTTATGTTTGT
Bacillus halodurans C-125 BH2356 -107 4.7 AAGAACACTTGTTTGT
-78 4.9 TAGAACTTATGTTTGC
Bacillus clausii KSM-K16 ABC2167 -107 4.6 AGGAACAACTGTTCGT
-76 4.9 TAGAACTTATGTTTGC
Oceanobacillus iheyensis HTE831 OB1669 -142 4.8 CAGAACAATTGTTCTT
-107 4.6 CCGAACATATGATCTT
-78 4.2 TAGAACGAGTGTTTGC
Paenibacillus sp. JDR-2 Pjdr2_2621 -157 4.4 CCGAACGTTTGTTCTG
-118 5.1 ACGAACAAATGTTTGC
-72 5.1 AAGAACTTATGTTTGT
Position: -92
Score: 5.1
Sequence: ACAAACATAGGTTCGA
Locus tag: BSU17860
BSU17860 -92 5.1 ACAAACATAGGTTCGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Pjdr2_2622
Ortholog function: Peptidoglycan-binding protein
Paenibacillus sp. JDR-2 Pjdr2_2622 -129 4.2 TAGAACCGGAGTTCGT
-113 5.1 ACAAACATAAGTTCTT
-97 4.8 AAAAACAAAAGTTCGC
-67 5 GCAAACATTTGTTCGT
-28 4.7 CAGAACAAACGTTCGG
Position: -220
Score: 4.9
Sequence: ACAAACATACGTTCTC
Locus tag: BSU18090
BSU18090 -220 4.9 ACAAACATACGTTCTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: parE
Ortholog function: Topoisomerase IV subunit B (EC 5.99.1.-)
Bacillus subtilis subsp. subtilis str. 168 BSU18090 -220 4.9 ACAAACATACGTTCTC
Bacillus amyloliquefaciens FZB42 RBAM_017900 -243 4.3 GCGAACTCATGTTCTT
Bacillus pumilus SAFR-032 BPUM_1709 -246 4.8 TAGAACATTTGTTCTG
Anoxybacillus flavithermus WK1 Aflv_1444 -30 4.7 AGAAACAAATGTTCTT
Geobacillus kaustophilus HTA426 GK1751 -40 4.1 AGAAACAGGTGTTCTT
Bacillus cereus ATCC 14579 BC3597 -44 4.6 AGAAACATATGTTCTG
Bacillus halodurans C-125 BH2140 -72 4.9 CCGAACATGCGTTTGT
Bacillus clausii KSM-K16 ABC1989 -64 4.5 CAGAACAAACATTCGT
Oceanobacillus iheyensis HTE831 OB1693 -57 4.6 AAGAACAGTTGTTCTA
Paenibacillus sp. JDR-2 Pjdr2_2492 -172 4 GCGAATTTATGTTATT
Position: -113
Score: 4.7
Sequence: TCGAACTTTTGTTCTG
Locus tag: BSU18950
BSU18950 -113 4.7 TCGAACTTTTGTTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yozL
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU18950 -113 4.7 TCGAACTTTTGTTCTG
-83 4.1 AGGAACGTTTGTTCTG
Bacillus subtilis subsp. subtilis str. 168 BSU21510 -78 4.7 TCGAACTTTTGTTCTG
-48 4.4 AAGAACGTTTGTTCTG
Position: -78
Score: 4.7
Sequence: TCGAACTTTTGTTCTG
Locus tag: BSU21510
BSU21510 -78 4.7 TCGAACTTTTGTTCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yozL
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU18950 -113 4.7 TCGAACTTTTGTTCTG
-83 4.1 AGGAACGTTTGTTCTG
Bacillus subtilis subsp. subtilis str. 168 BSU21510 -78 4.7 TCGAACTTTTGTTCTG
-48 4.4 AAGAACGTTTGTTCTG
Position: -281
Score: 4.3
Sequence: AGGAATATTCGTTCGG
Locus tag: BSU22790
BSU22790 -281 4.3 AGGAATATTCGTTCGG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hupA
Ortholog function: DNA-binding protein HU 1
Bacillus subtilis subsp. subtilis str. 168 BSU22790 -281 4.3 AGGAATATTCGTTCGG
Bacillus amyloliquefaciens FZB42 RBAM_020950 -282 4.5 AGGAATATTTGTTCGG
Bacillus pumilus SAFR-032 BPUM_2010 -277 4.4 AGGAATATTCGTTCGC
-241 3.9 ACGAATAAGGATTCTT
Bacillus licheniformis DSM 13 BLi02414 -280 4.8 AGGAATATTTGTTCGT
Position: -171
Score: 4.7
Sequence: CAGAACATAAATTCGT
Locus tag: BSU23300
BSU23300 -171 4.7 CAGAACATAAATTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ypuD
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU23300 -171 4.7 CAGAACATAAATTCGT
Bacillus amyloliquefaciens FZB42 RBAM_021430 -177 4.7 CAGAACATAAATTCGT
Bacillus pumilus SAFR-032 BPUM_2062 -169 4 AAGAACGCATATTCGT
Bacillus licheniformis DSM 13 BLi02476 -177 4 CAGAATGTACATTCGT
Position: -57
Score: 4.7
Sequence: ACGAACATACTTTCGC
Position: -29
Score: 4.9
Sequence: GCGAACATAAGTTCTT
Locus tag: BSU23710
BSU23710 -57 4.7 ACGAACATACTTTCGC
-29 4.9 GCGAACATAAGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqjW
Ortholog function: DNA polymerase IV (EC 2.7.7.7)
Bacillus subtilis subsp. subtilis str. 168 BSU23710 -57 4.7 ACGAACATACTTTCGC
-29 4.9 GCGAACATAAGTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_021830 -28 4.3 CAGAACAAATGTTCCC
Bacillus pumilus SAFR-032 BPUM_2102 -29 4.9 CAGAACATACGTTCTA
Bacillus halodurans C-125 BH2741 -57 4 ACGAACAAATATTCAC
-30 5 CAGAACAAATGTTCTT
Bacillus clausii KSM-K16 ABC3826 -85 4.1 CCGAACGTCTATTCGT
Paenibacillus sp. JDR-2 Pjdr2_3737 -66 4.2 GCGAACATACATTCGG
-37 4.7 ACGAACATACTTTCGC
Position: -268
Score: 4.1
Sequence: TCGAGCAAGAGTTCTT
Locus tag: BSU24580
BSU24580 -268 4.1 TCGAGCAAGAGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yqhH
Ortholog function: Uncharacterized ATP-dependent helicase YqhH, SNF2 family
Bacillus subtilis subsp. subtilis str. 168 BSU24580 -268 4.1 TCGAGCAAGAGTTCTT
Position: -127
Score: 4.4
Sequence: CAGAACGATTGTTCTT
Locus tag: BSU25690
BSU25690 -127 4.4 CAGAACGATTGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sda
Ortholog function: Sporulation inhibitor sda
Bacillus subtilis subsp. subtilis str. 168 BSU25690 -127 4.4 CAGAACGATTGTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_023990 -144 4.4 CAGAACGATTGTTCTT
Bacillus pumilus SAFR-032 BPUM_2304 -145 4.4 CAGAACGATTGTTCTT
Bacillus licheniformis DSM 13 BLi02762 -145 4.2 CAGAACGATTGTTCTC
Anoxybacillus flavithermus WK1 Aflv_0810 -181 4 AAAAACCGACGTTTTT
-57 4.4 CAGAACGATTGTTCTT
Geobacillus kaustophilus HTA426 GK2527 -105 3.9 CAGAACGGTTGTTCTC
Position: -59
Score: 5
Sequence: AAAAACAAACGTTCGT
Locus tag: BSU28490
BSU28490 -59 5 AAAAACAAACGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrC
Ortholog function: Excinuclease ABC subunit C
Bacillus subtilis subsp. subtilis str. 168 BSU28490 -59 5 AAAAACAAACGTTCGT
Bacillus amyloliquefaciens FZB42 RBAM_025550 -62 5.2 AAAAACAAATGTTCGT
Bacillus pumilus SAFR-032 BPUM_2506 -62 5.2 TAAAACAAATGTTCGT
Bacillus cereus ATCC 14579 BC4520 -83 4.1 AAGAACGTATGTTGGG
Paenibacillus sp. JDR-2 Pjdr2_4818 -329 4.3 CGAAACATGCGTTCGA
Position: -76
Score: 4.5
Sequence: AAGAACATTTGTTTCT
Locus tag: BSU29230
BSU29230 -76 4.5 AAGAACATTTGTTTCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnaE
Ortholog function: DNA polymerase III alpha subunit (EC 2.7.7.7)
Bacillus subtilis subsp. subtilis str. 168 BSU29230 -76 4.5 AAGAACATTTGTTTCT
Bacillus amyloliquefaciens FZB42 RBAM_026280 -69 4.5 AAGAACATTTGTTTCT
Bacillus pumilus SAFR-032 BPUM_2566 -73 4.5 AAGAACATTTGTTTCT
Bacillus licheniformis DSM 13 BLi03072 -74 4.5 AAGAACATTTGTTTCT
Oceanobacillus iheyensis HTE831 OB2177 -161 4.1 GCGAAAAAACGTTCTT
-63 4.1 CCGTATACATGTTCGT
Position: -79
Score: 4.7
Sequence: AGAAACAAATGTTCTT
Locus tag: BSU29239
BSU29239 -79 4.7 AGAAACAAATGTTCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytrH
Ortholog function: Sporulation membrane protein
Bacillus subtilis subsp. subtilis str. 168 BSU29239 -79 4.7 AGAAACAAATGTTCTT
Bacillus amyloliquefaciens FZB42 RBAM_026290 -80 4.7 AGAAACAAATGTTCTT
Bacillus pumilus SAFR-032 BPUM_2567 -80 4.7 AGAAACAAATGTTCTT
Bacillus licheniformis DSM 13 BLi03073 -81 4.7 AGAAACAAATGTTCTT
Position: -93
Score: 4.9
Sequence: CCGAACTTTAGTTCGT
Locus tag: BSU35170
BSU35170 -93 4.9 CCGAACTTTAGTTCGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uvrB
Ortholog function: Excinuclease ABC subunit B
Bacillus subtilis subsp. subtilis str. 168 BSU35170 -93 4.9 CCGAACTTTAGTTCGT
Bacillus amyloliquefaciens FZB42 RBAM_032310 -90 5 TCGAACTTTAGTTCGT
Bacillus pumilus SAFR-032 BPUM_3148 -82 4.9 CCGAACTTTAGTTCGT
Bacillus licheniformis DSM 13 BLi03759 -81 4.9 CCGAACTTTAGTTCGT
Anoxybacillus flavithermus WK1 Aflv_2547 -81 5.1 TAGAATATTTGTTCGT
Geobacillus kaustophilus HTA426 GK3086 -85 4.8 ACGAATATGAGTTCGC
Bacillus cereus ATCC 14579 BC5168 -86 4.9 CCGAATATCTGTTCGT
Bacillus halodurans C-125 BH3595 -91 4.9 CAAAACAAACGTTCGT
Bacillus clausii KSM-K16 ABC3059 -337 4.4 TAGTACGTATGTTCGT
Oceanobacillus iheyensis HTE831 OB2488 -70 4.7 ACGAATACTTGTTCGT
Position: -99
Score: 4.8
Sequence: CAGAACAAGTGTTCTT
Position: -69
Score: 4.7
Sequence: CCGAACGTATGTTTGC
Locus tag: BSU35770
BSU35770 -99 4.8 CAGAACAAGTGTTCTT
-69 4.7 CCGAACGTATGTTTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: tagC
Ortholog function: Polyglycerol phosphate assembly and export
Bacillus subtilis subsp. subtilis str. 168 BSU35770 -99 4.8 CAGAACAAGTGTTCTT
-69 4.7 CCGAACGTATGTTTGC
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