Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YrkD regulog to Anoxybacillus flavithermus WK1

Reference regulog properties
Source regulog: YrkD - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Anoxybacillus flavithermus WK1
Orthologous TF(s) Aflv_1433
Regulated genes 7
Built upon 39 sites [see more]
Predicted regulatory interactions in Anoxybacillus flavithermus WK1
Locus tag Position Score Sequence
Position: -93
Score: 4.5
Sequence: AATCCCCTATGGGTAT
Locus tag: Aflv_0282
Aflv_0282 -93 4.5 AATCCCCTATGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmt2
Ortholog function: Sulfide-quinone reductase
Anoxybacillus flavithermus WK1 Aflv_0282 -93 4.5 AATCCCCTATGGGTAT
Bacillus licheniformis DSM 13 BLi02786 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Geobacillus kaustophilus HTA426 GK2090 -91 4.5 AATCCCCTATGGGTAT
Position: -40
Score: 5.3
Sequence: ATACCTATTAGGGTAT
Locus tag: Aflv_1298
Aflv_1298 -40 5.3 ATACCTATTAGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Aflv_1298
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_1298 -40 5.3 ATACCTATTAGGGTAT
Position: -32
Score: 4.6
Sequence: TTACACGTACTTGTAT
Locus tag: Aflv_1299
Aflv_1299 -32 4.6 TTACACGTACTTGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Aflv_0303
Ortholog function: CoA-disulfide reductase (EC 1.8.1.14) / Rhodanese domain protein
Anoxybacillus flavithermus WK1 Aflv_1299 -32 4.6 TTACACGTACTTGTAT
Bacillus cereus ATCC 14579 BC0791 -68 5.8 ATACCCATACAGGTAT
Geobacillus kaustophilus HTA426 GK2091 -98 5.5 ATACATATAGGGGTAT
Position: -28
Score: 5.2
Sequence: ATACTGATAAGGGTAT
Locus tag: Aflv_1433
Aflv_1433 -28 5.2 ATACTGATAAGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkD
Ortholog function: Transcriptional regulator, RcnR family
Anoxybacillus flavithermus WK1 Aflv_1433 -28 5.2 ATACTGATAAGGGTAT
Bacillus amyloliquefaciens FZB42 RBAM_005420 -127 5.8 ATACCTGTAAGGGTAT
Bacillus cereus ATCC 14579 BC0792 -71 5 ATACCCTATAGGGTAT
Bacillus licheniformis DSM 13 BLi02795 -184 5.5 ATACGCATAGGGGTAT
Bacillus pumilus SAFR-032 BPUM_0189 -46 5.2 ATACCGCTTAGGGTAT
Bacillus subtilis subsp. subtilis str. 168 BSU26550 -508 5.4 ATACCtaTggGGGTAT
Geobacillus kaustophilus HTA426 GK2071 -56 5.1 ATACTATTAGGGGTAT
Position: -36
Score: 4.9
Sequence: ATACCCTATAAGGTAT
Locus tag: Aflv_2342
Aflv_2342 -36 4.9 ATACCCTATAAGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkH
Ortholog function: Zn-dependent hydroxyacylglutathione hydrolase / Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2342 -36 4.9 ATACCCTATAAGGTAT
Geobacillus kaustophilus HTA426 GK2065 -22 4.6 ATACATTAGGGGGTAT
Position: -50
Score: 5.3
Sequence: ATACGTATAGGGGTAT
Locus tag: Aflv_2343
Aflv_2343 -50 5.3 ATACGTATAGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: grx
Ortholog function: Predicted glutaredoxin
Anoxybacillus flavithermus WK1 Aflv_2343 -50 5.3 ATACGTATAGGGGTAT
Position: -68
Score: 5
Sequence: ATACTCATAGAGGTAA
Position: -22
Score: 5.5
Sequence: ATACCCTTATGAGTAT
Locus tag: Aflv_2348
Aflv_2348 -68 5 ATACTCATAGAGGTAA
-22 5.5 ATACCCTTATGAGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Aflv_2348
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2348 -68 5 ATACTCATAGAGGTAA
-22 5.5 ATACCCTTATGAGTAT
Bacillus cereus ATCC 14579 BC0797 -20 5 ATACCTATGGGGGTAA
Geobacillus kaustophilus HTA426 GK2067 -69 5.5 ATACCCATATATGTAT
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