Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of UxuR regulog to Bacillus clausii KSM-K16

Reference regulog properties
Source regulog: UxuR - Bacillales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucuronate utilization
Effector: Aldotetraouronic acid
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus clausii KSM-K16
Orthologous TF(s) ABC0604, ABC4047
Regulated genes 3
Built upon 7 sites [see more]
Predicted regulatory interactions in Bacillus clausii KSM-K16
Locus tag Position Score Sequence
Position: -31
Score: 5.4
Sequence: CTACCATACTAGTATAAGTA
Locus tag: ABC0604
ABC0604 -31 5.4 CTACCATACTAGTATAAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR
Ortholog function: Transcriptional regulator of glucuronate utilization, GntR family
Bacillus clausii KSM-K16 ABC0604 -31 5.4 CTACCATACTAGTATAAGTA
Bacillus licheniformis DSM 13 BLi01354 -44 6 CAGCCATACTTGTATGGTAG
Position: -146
Score: 6
Sequence: CTACCACACTTGTATGGTAG
Locus tag: ABC0630
ABC0630 -146 6 CTACCACACTTGTATGGTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxmD
Ortholog function: Predicted mannuronate dehydrogenase (EC 1.1.1.131)
Bacillus clausii KSM-K16 ABC0630 -146 6 CTACCACACTTGTATGGTAG
Bacillus licheniformis DSM 13 BLi01355 -44 6 CAGCCATACTTGTATGGTAG
Position: -62
Score: 5.8
Sequence: CTACCATATTTGTATGGTAG
Locus tag: ABC4047
ABC4047 -62 5.8 CTACCATATTTGTATGGTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuR2
Ortholog function: Transcriptional regulator of glucuronate utilization, GntR family
Bacillus clausii KSM-K16 ABC4047 -62 5.8 CTACCATATTTGTATGGTAG
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