Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CsoR regulog to Bacillus clausii KSM-K16

Reference regulog properties
Source regulog: CsoR - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus clausii KSM-K16
Orthologous TF(s) ABC2444
Regulated genes 3
Built upon 25 sites [see more]
Predicted regulatory interactions in Bacillus clausii KSM-K16
Locus tag Position Score Sequence
Position: -57
Score: 5.1
Sequence: ATACCTGACGGGGGTAT
Locus tag: ABC2443
ABC2443 -57 5.1 ATACCTGACGGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: copZ
Ortholog function: Copper insertion chaperone and transporter component
Bacillus subtilis subsp. subtilis str. 168 BSU33510 -57 5.9 ATACCCTACGGGGGTAT
Bacillus amyloliquefaciens FZB42 RBAM_030690 -44 5.9 ATACCCTACAGGGGTAT
Bacillus pumilus SAFR-032 BPUM_3022 -55 5.9 ATACCCTACTAGGGTAT
Bacillus licheniformis DSM 13 BLi03554 -65 5.9 ATACCCTACAGGGGTAT
Bacillus cereus ATCC 14579 BC3731 -71 5.1 TTACCTTAGGGGGGTAT
Bacillus halodurans C-125 BH0556 -54 4.9 ATACAATAGGGGGGTAT
Bacillus clausii KSM-K16 ABC2443 -57 5.1 ATACCTGACGGGGGTAT
Position: -64
Score: 5.9
Sequence: ATACCCCTATAGGGTAT
Locus tag: ABC3231
ABC3231 -64 5.9 ATACCCCTATAGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: copA
Ortholog function: Copper-translocating P-type ATPase (EC 3.6.3.4)
Bacillus halodurans C-125 BH0557 -31 5.3 ATACCTAATAGGGGTAT
Bacillus clausii KSM-K16 ABC3231 -64 5.9 ATACCCCTATAGGGTAT
Position: -51
Score: 6
Sequence: ATACCCCACTAGGGTAT
Locus tag: ABC3339
ABC3339 -51 6 ATACCCCACTAGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydhK
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU05790 -43 5.2 ATACCGTTCGGGGGTAT
Bacillus clausii KSM-K16 ABC3339 -51 6 ATACCCCACTAGGGTAT
© 2009-2020 RegPrecise