Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RmgR regulog to Bacillus clausii KSM-K16

Reference regulog properties
Source regulog: RmgR - Bacillales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnogalacturonides utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus clausii KSM-K16
Orthologous TF(s) ABC1143
Regulated genes 1
Built upon 10 sites [see more]
Predicted regulatory interactions in Bacillus clausii KSM-K16
Locus tag Position Score Sequence
Position: 13
Score: 5.4
Sequence: TTGTTT-(12)-TCGTTT
Locus tag: ABC1150
ABC1150 13 5.4 TTGTTT-(12)-TCGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yteS
Ortholog function: putative lipoprotein required for rhamnogalaturonan degradation
Bacillus halodurans C-125 BH0486 -155 7.7 TCATTA-(13)-TCATTT
Bacillus clausii KSM-K16 ABC1150 -174 5.3 TCATTT-(13)-gCAaaT