Propagation of FadR regulog to Bacillus clausii KSM-K16
| Source regulog: | FadR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus clausii KSM-K16 |
| Orthologous TF(s) | ABC2672 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -38
Score: 6.4 Sequence: GTGAATGATTACTCATTCAT
Locus tag: ABC0525
|
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| ABC0525 | -38 | 6.4 | GTGAATGATTACTCATTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Aflv_1606 | ||||
| Ortholog function: hypothetical Zn-dependent hydrolase | ||||
| Anoxybacillus flavithermus WK1 | Aflv_1606 | -53 | 6.5 | ATGAATGAATATTCATTCTT |
| Geobacillus kaustophilus HTA426 | GK1401 | -76 | 5.5 | AAAAATGAATGATCATTCAT |
| Bacillus clausii KSM-K16 | ABC0525 | -38 | 6.4 | GTGAATGATTACTCATTCAT |
| Oceanobacillus iheyensis HTE831 | OB0204 | -73 | 6.6 | ATGACTGATTATTCATTCAT |
|
Position: -45
Score: 6.8 Sequence: ATGAATGAACATTCATTCAT
Locus tag: ABC2672
|
||||
| ABC2672 | -45 | 6.8 | ATGAATGAACATTCATTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadR | ||||
| Ortholog function: Transcriptional regulator of fatty acids degradation, TetR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28550 | -44 | 6.9 | ATGAATGAATAGTCATTCAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_025610 | -38 | 6.9 | ATGAATGAATAGTCATTCAT |
| Bacillus pumilus SAFR-032 | BPUM_2512 | -41 | 6.8 | ATGAATGAATACTCATTCAA |
| Bacillus licheniformis DSM 13 | BLi03002 | -43 | 6.9 | ATGAATGAGTATTCATTCAT |
| Anoxybacillus flavithermus WK1 | Aflv_0565 | -44 | 6.9 | ATGAATGATTATTCATTCAT |
| Geobacillus kaustophilus HTA426 | GK2689 | -60 | 6.1 | ATGAATGATGGTTCATTCAT |
| Bacillus cereus ATCC 14579 | BC4525 | -45 | 6.6 | ATGAATGACTATTCATTCAG |
| Bacillus halodurans C-125 | BH3102 | -38 | 6.9 | ATGAATGAATACTCATTCAT |
| Bacillus clausii KSM-K16 | ABC2672 | -45 | 6.8 | ATGAATGAACATTCATTCAT |
| Oceanobacillus iheyensis HTE831 | OB2121 | -50 | 5.9 | ATGAATGATCATTCACTCAG |
|
Position: -46
Score: 5.9 Sequence: ATGAATGAGTGTTCATTCGG
Locus tag: ABC2990
|
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| ABC2990 | -46 | 5.9 | ATGAATGAGTGTTCATTCGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadN | ||||
| Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU32840 | 39 | 6.7 | ATGAATGACTATTCATTCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_029920 | -39 | 6.7 | ATGAATGACTATTCATTCAA |
| Bacillus pumilus SAFR-032 | BPUM_2942 | -39 | 6.5 | ATGAATGACTGTTCATTCAA |
| Bacillus licheniformis DSM 13 | BLi03466 | -39 | 6.8 | ATGAATGAGTATTCATTCAA |
| Geobacillus kaustophilus HTA426 | GK3008 | -40 | 6.5 | ATGAATGACCATTCATTCAA |
| Bacillus cereus ATCC 14579 | BC5004 | -38 | 6.5 | TTGAATGAGCATTCATTCAA |
| Bacillus halodurans C-125 | BH3488 | -36 | 6.5 | ATGAATGAGTATTCATTCGT |
| Bacillus clausii KSM-K16 | ABC2990 | -46 | 5.9 | ATGAATGAGTGTTCATTCGG |
| Oceanobacillus iheyensis HTE831 | OB2395 | -41 | 6.6 | ATGAATGAGCATTCATTCAA |
|
Position: -109
Score: 6.2 Sequence: CTGACTGAATGCTCATTCAT
Locus tag: ABC3892
|
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| ABC3892 | -109 | 6.2 | CTGACTGAATGCTCATTCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadF | ||||
| Ortholog function: Fe-S oxidoreductase | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU37180 | -98 | 6.3 | TTGACTGAACACTCATTCAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_034330 | -82 | 6.3 | TTGACTGAACACTCATTCAT |
| Bacillus pumilus SAFR-032 | BPUM_3374 | -88 | 6.6 | TTGACTGAATACTCATTCAT |
| Bacillus licheniformis DSM 13 | BLi03969 | -82 | 6.3 | TTGACTGAACACTCATTCAT |
| Anoxybacillus flavithermus WK1 | Aflv_2740 | -85 | 6.3 | TTGACTGAATGCTCATTCAT |
| Geobacillus kaustophilus HTA426 | GK3398 | -106 | 6.3 | TTGACTGAATGCTCATTCAT |
| Bacillus cereus ATCC 14579 | BC5345 | -115 | 5.9 | TTGACTGAATGCTCACTCAT |
| Bacillus halodurans C-125 | BH3802 | -123 | 6.5 | ATGAGTGAATACTCATTCAT |
| Bacillus clausii KSM-K16 | ABC3892 | -109 | 6.2 | CTGACTGAATGCTCATTCAT |
| Oceanobacillus iheyensis HTE831 | OB3014 | -106 | 6.3 | TTGACTGAATGATCATTCAT |