Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of BirA regulog to Bacillus clausii KSM-K16

Reference regulog properties
Source regulog: BirA - Bacillales
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus clausii KSM-K16
Orthologous TF(s) ABC2068
Regulated genes 2
Built upon 36 sites [see more]
Predicted regulatory interactions in Bacillus clausii KSM-K16
Locus tag Position Score Sequence
Position: -87
Score: 8.5
Sequence: ATGTAAAC-(15)-GTTGACAA
Locus tag: ABC0344
ABC0344 -87 8.5 ATGTAAAC-(15)-GTTGACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhfT
Ortholog function: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Bacillus subtilis subsp. subtilis str. 168 BSU10360 -88 8.5 ATGTAAAC-(15)-GTTGACAT
Bacillus amyloliquefaciens FZB42 RBAM_010540 -87 8.6 ATGTTAAC-(15)-GTTGACAT
Bacillus pumilus SAFR-032 BPUM_2375 -88 8.6 ATGTTAAC-(15)-GTTGACAT
Bacillus cereus ATCC 14579 BC3628 -111 8.6 TTGTAAAC-(15)-GTTGACAA
-46 7.7 ATGTTACC-(15)-GTTTACAA
Bacillus clausii KSM-K16 ABC0344 -87 8.5 ATGTAAAC-(15)-GTTGACAA
Position: -82
Score: 8.7
Sequence: TTGTTAAC-(15)-GTTGACAA
Locus tag: ABC2607
ABC2607 -82 8.7 TTGTTAAC-(15)-GTTGACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioY2
Ortholog function: Substrate-specific component BioY of biotin ECF transporter
Bacillus subtilis subsp. subtilis str. 168 BSU10370 -88 8.5 ATGTAAAC-(15)-GTTGACAT
Bacillus amyloliquefaciens FZB42 RBAM_010550 -87 8.6 ATGTTAAC-(15)-GTTGACAT
Bacillus pumilus SAFR-032 BPUM_2376 -88 8.6 ATGTTAAC-(15)-GTTGACAT
Bacillus cereus ATCC 14579 BC3629 -111 8.6 TTGTAAAC-(15)-GTTGACAA
-46 7.7 ATGTTACC-(15)-GTTTACAA
Bacillus clausii KSM-K16 ABC2607 -82 8.7 TTGTTAAC-(15)-GTTGACAA
Paenibacillus sp. JDR-2 Pjdr2_3366 -158 8.8 TTGTTAAC-(18)-GTTAACAt
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