Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fnr regulog to Bacillus clausii KSM-K16

Reference regulog properties
Source regulog: Fnr - Bacillales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator
Biological process: Anaerobic metabolism
Effector: Oxygen
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus clausii KSM-K16
Orthologous TF(s) No orthologous TFs found
Regulated genes 2
Built upon 39 sites [see more]
Predicted regulatory interactions in Bacillus clausii KSM-K16
Locus tag Position Score Sequence
Position: -78
Score: 5.2
Sequence: TGTGAATAAATTCACT
Locus tag: ABC0722
ABC0722 -78 5.2 TGTGAATAAATTCACT
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: Nitrate/nitrite transporter
Bacillus subtilis subsp. subtilis str. 168 BSU37320 -80 6 TGTGATGTAATTCACA
Bacillus amyloliquefaciens FZB42 RBAM_034470 -79 6 TGTGATGTAATTCACA
Bacillus licheniformis DSM 13 BLi02081 -95 6 TGTGACGTAATTCACA
Geobacillus kaustophilus HTA426 GK0766 -68 4.7 TGTGATCAACCTCACA
Position: -66
Score: 5.4
Sequence: TGTGAAATAATGCACA
Position: -43
Score: 5.4
Sequence: TGTGAATAATTTCACA
Locus tag: ABC2872
ABC2872 -66 5.4 TGTGAAATAATGCACA
-43 5.4 TGTGAATAATTTCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Bacillus subtilis subsp. subtilis str. 168 BSU03050 -83 4.7 TGTGAAGTGTTGCACA
-60 6 TGTGAAATACTTCACA
Bacillus amyloliquefaciens FZB42 RBAM_003290 -80 5.4 TGTGAAGTATTGCACA
-57 6 TGTGAAATACTTCACA
Bacillus pumilus SAFR-032 BPUM_0277 -77 5.4 TGTGAAGTATTGCACA
-54 6 TGTGAAATACTTCACA
Bacillus licheniformis DSM 13 BLi00366 -80 5.4 TGTGAAGTATTGCACA
-57 5.4 TGTGAAGAATTTCACA
Geobacillus kaustophilus HTA426 GK0475 -40 4.9 TGTGAATATATTCACA
Bacillus halodurans C-125 BH3937 -274 6 TGTGAAATATTTCACA
-217 6 TGTGAAATATTTCACA
-42 4.8 TGTGAAAATATTCACA
Bacillus clausii KSM-K16 ABC2872 -66 5.4 TGTGAAATAATGCACA
-43 5.4 TGTGAATAATTTCACA
Oceanobacillus iheyensis HTE831 OB3279 -66 6 TGTGAAATATTTCACA