Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Rex regulog to Bacillus clausii KSM-K16

Reference regulog properties
Source regulog: Rex - Bacillales
Regulator type: Transcription factor
Regulator family: Rex
Regulation mode: repressor
Biological process: Energy metabolism
Effector: NADH
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus clausii KSM-K16
Orthologous TF(s) ABC0873
Regulated genes 3
Built upon 64 sites [see more]
Predicted regulatory interactions in Bacillus clausii KSM-K16
Locus tag Position Score Sequence
Position: -72
Score: 5.2
Sequence: TTTGCTCAATGGTTCACAAA
Locus tag: ABC1842
ABC1842 -72 5.2 TTTGCTCAATGGTTCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: noxE
Ortholog function: NADH oxidase (EC 1.6.99.3)
Bacillus clausii KSM-K16 ABC1842 -114 5 TTTGCTCACCAGTTCACAAT
-72 5.2 TTTGCTCAATGGTTCACAAA
-41 4.8 CTTGTGAAATTACTCACATT
Position: -68
Score: 6.4
Sequence: TTTGTGAAATAATGCACAAT
Position: -45
Score: 5.9
Sequence: AATGTGAATAATTTCACAAA
Locus tag: ABC2872
ABC2872 -68 6.4 TTTGTGAAATAATGCACAAT
-45 5.9 AATGTGAATAATTTCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ldh
Ortholog function: L-lactate dehydrogenase (EC 1.1.1.27)
Bacillus subtilis subsp. subtilis str. 168 BSU03050 -85 6 TTTGTGAAGTGTTGCACAAT
-62 6 AATGTGAAATACTTCACAAA
Bacillus amyloliquefaciens FZB42 RBAM_003290 -82 6.3 TTTGTGAAGTATTGCACAAT
-59 5.6 AATGTGAAATACTTCACAAG
Bacillus pumilus SAFR-032 BPUM_0277 -79 6.3 TTTGTGAAGTATTGCACAAT
-56 5.7 AATGTGAAATACTTCACATA
Bacillus licheniformis DSM 13 BLi00366 -82 6 TATGTGAAGTATTGCACAAT
-59 5.8 AATGTGAAGAATTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_0889 -58 5.4 TTTGTGAAACAGTGTACAAT
Geobacillus kaustophilus HTA426 GK0475 -42 5.5 AATGTGAATATATTCACAAA
Bacillus halodurans C-125 BH3937 -276 6.2 AATGTGAAATATTTCACAAA
-219 5.7 CATGTGAAATATTTCACAAA
-44 5.1 CATGTGAAAATATTCACAAA
Bacillus clausii KSM-K16 ABC2872 -68 6.4 TTTGTGAAATAATGCACAAT
-45 5.9 AATGTGAATAATTTCACAAA
Oceanobacillus iheyensis HTE831 OB3279 -68 6.5 TTTGTGAAATATTTCACAAT
Position: -55
Score: 4.8
Sequence: AAAGTGAAATGAATCACAAA
Locus tag: ABC2924
ABC2924 -55 4.8 AAAGTGAAATGAATCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh2
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Bacillus licheniformis DSM 13 BLi03392 -119 4.9 AAAGTGAAGGGTTTCACAAA
Anoxybacillus flavithermus WK1 Aflv_2402 -76 5.5 TTCGTGAATAAATTCACAAA
Geobacillus kaustophilus HTA426 GK2953 -102 5.6 AACGTGAATTATTTCACAAA
Bacillus clausii KSM-K16 ABC2924 -55 4.8 AAAGTGAAATGAATCACAAA
Paenibacillus sp. JDR-2 Pjdr2_4834 -64 5.7 ATTGTGTAATTTTTCACAAA
© 2009-2020 RegPrecise