Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of GudR regulog to Bacillus clausii KSM-K16

Reference regulog properties
Source regulog: GudR - Bacillales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Glucarate utilization; Galactarate utilization
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus clausii KSM-K16
Orthologous TF(s) ABC0472
Regulated genes 3
Built upon 7 sites [see more]
Predicted regulatory interactions in Bacillus clausii KSM-K16
Locus tag Position Score Sequence
Position: -50
Score: 5.9
Sequence: TCTATTTGTCTTACAATTAAT
Locus tag: ABC0466
ABC0466 -50 5.9 TCTATTTGTCTTACAATTAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ABC0466
Ortholog function: Putative mannonate dehydratase (EC 4.2.1.8)
Bacillus clausii KSM-K16 ABC0466 -50 5.9 TCTATTTGTCTTACAATTAAT
Position: -51
Score: 6.5
Sequence: TTAATTTGTCTTACAATAAAA
Locus tag: ABC0471
ABC0471 -51 6.5 TTAATTTGTCTTACAATAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgD
Ortholog function: 5-dehydro-4-deoxyglucarate dehydratase (EC 4.2.1.41)
Bacillus subtilis subsp. subtilis str. 168 BSU02460 -117 7 TTTATTTGTCTTACAATTAAA
Bacillus licheniformis DSM 13 BLi00284 -119 7 TTTATTTGTCTTACAATTAAA
Bacillus clausii KSM-K16 ABC0471 -51 6.5 TTAATTTGTCTTACAATAAAA
Oceanobacillus iheyensis HTE831 OB2841 -90 6.6 TTTATTTGTCGGACAAATAAA
Position: -63
Score: 5.9
Sequence: CCTATTTGTATTACAATTAAA
Locus tag: ABC0472
ABC0472 -63 5.9 CCTATTTGTATTACAATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gudR
Ortholog function: Transcriptional regulator for glucarate/galactarate utilization, GntR family
Bacillus subtilis subsp. subtilis str. 168 BSU02500 -42 5.5 CTATTTTGTCTTACAATTGAA
Bacillus licheniformis DSM 13 BLi00288 -119 7 TTTATTTGTCTTACAATTAAA
Bacillus clausii KSM-K16 ABC0472 -63 5.9 CCTATTTGTATTACAATTAAA
Oceanobacillus iheyensis HTE831 OB2842 -90 6.6 TTTATTTGTCGGACAAATAAA
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