Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CitT regulog to Bacillus clausii KSM-K16

Reference regulog properties
Source regulog: CitT - Bacillales
Regulator type: Transcription factor
Regulator family: CitB
Regulation mode: activator
Biological process: Citrate utilization
Effector: Citrate
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus clausii KSM-K16
Orthologous TF(s) ABC0666, ABC1012
Regulated genes 2
Built upon 8 sites [see more]
Predicted regulatory interactions in Bacillus clausii KSM-K16
Locus tag Position Score Sequence
Position: -123
Score: 5.8
Sequence: TAAACAAAATGGACAAAA
Position: -114
Score: 6.2
Sequence: TGGACAAAATAAAAAAAA
Position: -105
Score: 4.7
Sequence: TAAAAAAAATGAATAGAA
Locus tag: ABC0100
ABC0100 -123 5.8 TAAACAAAATGGACAAAA
-114 6.2 TGGACAAAATAAAAAAAA
-105 4.7 TAAAAAAAATGAATAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citM
Ortholog function: Mg(2+) Citrate transporter (TC 2.A.11.1.1)
Bacillus halodurans C-125 BH0745 -163 4.7 TGAACAAAATAAACAAAA
Bacillus clausii KSM-K16 ABC0100 -114 4.2 TGGACAAAATAAAAAAAA
Position: -118
Score: 5.2
Sequence: TGAACTTTATGAACAAAA
Position: -109
Score: 5.6
Sequence: TGAACAAAATAAATAATA
Locus tag: ABC1013
ABC1013 -118 5.2 TGAACTTTATGAACAAAA
-109 5.6 TGAACAAAATAAATAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tctC
Ortholog function: Predicted citrate transport protein TctC
Oceanobacillus iheyensis HTE831 OB3249 -118 4.7 TGAACAAAAAGAACAAAA
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