Propagation of TnrA regulog to Anoxybacillus flavithermus WK1

Reference regulog properties
Source regulog:	TnrA - Bacillales
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor (activator)
Biological process:	Nitrogen assimilation
Effector:	NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum:	Firmicutes
Propagated regulon:
Target genome	Anoxybacillus flavithermus WK1
Orthologous TF(s)	Aflv_1544
Regulated genes	17

Built upon 304 sites [see more]

Predicted regulatory interactions in *Anoxybacillus flavithermus WK1*
	Locus tag	Position	Score	Sequence
Position: -33 Score: 4.4 Sequence: TGAAATATATTATTTCA Locus tag: Aflv_0358
	Aflv_0358	-33	4.4	TGAAATATATTATTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gsiA
Ortholog function: Glutathione import ATP-binding protein
Anoxybacillus flavithermus WK1	Aflv_0358	-33	4.4	TGAAATATATTATTTCA
Bacillus clausii KSM-K16	ABC1240	-135	5.1	TGTTAGAAAACATAACA

Position: 2 Score: 4 Sequence: GGTAAAAGTATATTACA Locus tag: Aflv_0593
	Aflv_0593	2	4	GGTAAAAGTATATTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvC
Ortholog function: Ketol-acid reductoisomerase (EC 1.1.1.86)
Bacillus subtilis subsp. subtilis str. 168	BSU28290	-691	5.1	TGTTATAAAATCTTCCA
Bacillus amyloliquefaciens FZB42	RBAM_025350	-611	5.2	TGTAATAAAATGTGACA
Anoxybacillus flavithermus WK1	Aflv_0593	2	4	GGTAAAAGTATATTACA
Oceanobacillus iheyensis HTE831	OB2621	-639	5.1	TGTAAGGTTTTCTTACA
		-531	4.3	ATTCATAAAATCTGACA

Position: 1 Score: 4.3 Sequence: TGTTACAATGTTTAACA Locus tag: Aflv_1238
	Aflv_1238	1	4.3	TGTTACAATGTTTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ilvD
Ortholog function: Dihydroxy-acid dehydratase (EC 4.2.1.9)
Bacillus pumilus SAFR-032	BPUM_1922	-162	5	GGTCAGATTTTATGACA
Bacillus licheniformis DSM 13	BLi02324	-248	4.5	TGTAATAAAATATCACT
Anoxybacillus flavithermus WK1	Aflv_1238	-19	4.1	TGTCATTTTATTTTAAA
		1	4.3	TGTTACAATGTTTAACA
Geobacillus kaustophilus HTA426	GK2046	-177	4.9	TGTAAGAAATTATGACG

Position: -112 Score: 4.6 Sequence: TGTCATGAAAAATAACA Position: -49 Score: 4.8 Sequence: TGTAATATATTATAACC Position: -27 Score: 5 Sequence: TGTTATAAAAAATGACA Locus tag: Aflv_1332
	Aflv_1332	-112	4.6	TGTCATGAAAAATAACA
		-49	4.8	TGTAATATATTATAACC
		-27	5	TGTTATAAAAAATGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: Ammonium transporter
Anoxybacillus flavithermus WK1	Aflv_1332	-112	4.6	TGTCATGAAAAATAACA
		-49	4.8	TGTAATATATTATAACC
		-27	5	TGTTATAAAAAATGACA
Geobacillus kaustophilus HTA426	GK1452	-124	4.4	TGTTAAGAAATTTAACA
		-48	5.4	TGTTATATATTATGACA
Bacillus halodurans C-125	BH3834	-138	4	TGTCAGATATAGGCACA
		-113	4.9	TGTCTGATTATCTGACA
		-41	4.3	TATTAGAAAAACTTACA
Bacillus clausii KSM-K16	ABC3928	-84	5.2	TGTTAGATATCCTGACA
Paenibacillus sp. JDR-2	Pjdr2_2141	-159	4.2	TGTGAAAAAACTTAACA
		-34	4.5	TGTTAGTAAACATCACA

Position: -16 Score: 4.9 Sequence: TGTGAGGTAATGTAACA Locus tag: Aflv_1403
	Aflv_1403	-16	4.9	TGTGAGGTAATGTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA2
Ortholog function: Glutamine synthetase type I (EC 6.3.1.2)
Anoxybacillus flavithermus WK1	Aflv_1403	-16	4.9	TGTGAGGTAATGTAACA
Geobacillus kaustophilus HTA426	GK1637	-16	4.9	TGTGAGGTAATGTGACA
Bacillus halodurans C-125	BH3867	-103	5.7	TGTCAGATAATCTAACA
		-33	4.9	TGTCACATTACATTACA
Bacillus clausii KSM-K16	ABC3940	-103	5.7	TGTCAGATAATCTGACA

Position: -43 Score: 5 Sequence: TGTCATAATAAATGACA Locus tag: Aflv_1455
	Aflv_1455	-43	5	TGTCATAATAAATGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: thyB
Ortholog function: Thymidylate synthase (EC 2.1.1.45)
Anoxybacillus flavithermus WK1	Aflv_1455	-43	5	TGTCATAATAAATGACA
Oceanobacillus iheyensis HTE831	OB1740	-98	4	TTTACGATTATGTAACA
Paenibacillus sp. JDR-2	Pjdr2_2655	-11	4.5	TGATATAAAAAGTGACA

Position: -82 Score: 4.7 Sequence: TGTGATAAAATGTAACG Locus tag: Aflv_1508
	Aflv_1508	-82	4.7	TGTGATAAAATGTAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family
Bacillus subtilis subsp. subtilis str. 168	BSU17450	-82	4.3	TGTTAAGAATCCTTACA
		-59	5	TGACACATAATATAACA
Bacillus amyloliquefaciens FZB42	RBAM_017250	-82	4.3	TGTTAAGATTCCTTACA
		-59	4.9	TGACACAAAATATAACA
Bacillus pumilus SAFR-032	BPUM_1636	-82	4.4	TGTTAATATTCCTAACA
		-59	5.1	TGACATATAATATAACA
		-54	4.2	TATAATATAACATGACA
Bacillus licheniformis DSM 13	BLi01992	-81	4.2	TGTAAAGAATCCTTACA
		-58	5	TGACACATTATATAACA
Anoxybacillus flavithermus WK1	Aflv_1508	-82	4.7	TGTGATAAAATGTAACG
		-59	4.3	TGACATATAAGTTAACA

Position: -113 Score: 4.9 Sequence: TGTTACTTTTTATAACA Position: -82 Score: 4.9 Sequence: TGTTACTTTTTATAACA Position: -27 Score: 5.4 Sequence: TGTTATAAAATATGACA Locus tag: Aflv_1544
	Aflv_1544	-113	4.9	TGTTACTTTTTATAACA
		-82	4.9	TGTTACTTTTTATAACA
		-27	5.4	TGTTATAAAATATGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168	BSU13310	-124	3.9	TGTTAATTTTTCTTCCG
		-81	5.5	TGTTAGAAAATATGACA
Bacillus amyloliquefaciens FZB42	RBAM_013130	-124	4.1	TGTCAATTTTTCTGCCG
		-81	4.8	CGTCAGAAAACCTGACA
Bacillus pumilus SAFR-032	BPUM_1230	-121	4	TGTCAACTTTCCTTCCA
		-80	5.5	TGTTATATTTTCTAACA
Bacillus licheniformis DSM 13	BLi01490	-124	3.8	TGTAAACTTTTCTTCCG
		-81	5.6	TGTTAGATTTTCTGACA
Anoxybacillus flavithermus WK1	Aflv_1544	-113	4.9	TGTTACTTTTTATAACA
		-82	4.9	TGTTACTTTTTATAACA
		-27	5.4	TGTTATAAAATATGACA
Geobacillus kaustophilus HTA426	GK1860	-86	3.9	TGTTAATTTTATTTACA
		-33	4.6	CGTTAGAAAATATAACG
Bacillus halodurans C-125	BH1494	-110	5.5	TGTAAGAAAATCTAACA
Bacillus clausii KSM-K16	ABC1760	-99	5.5	TGTTAGATTTTCTTACA
		-57	5	TGTGATATATTGTTACA
Oceanobacillus iheyensis HTE831	OB1650	-80	5.1	TGTTAGAAATACTAACA
		-57	4.3	TGACATATAAGCTGACG
Paenibacillus sp. JDR-2	Pjdr2_5154	-302	5.7	TGTTAGATAATCTAACA
		-41	5	TGTTAGAAAACATTACA

Position: -172 Score: 5.4 Sequence: TGTCATATTTTATAACA Position: -117 Score: 4.9 Sequence: TGTTATAAAAAGTAACA Position: -86 Score: 4.9 Sequence: TGTTATAAAAAGTAACA Locus tag: Aflv_1545
	Aflv_1545	-172	5.4	TGTCATATTTTATAACA
		-117	4.9	TGTTATAAAAAGTAACA
		-86	4.9	TGTTATAAAAAGTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Aflv_1545
Ortholog function: Hypothetical protein
Anoxybacillus flavithermus WK1	Aflv_1545	-172	5.4	TGTCATATTTTATAACA
		-117	4.9	TGTTATAAAAAGTAACA
		-86	4.9	TGTTATAAAAAGTAACA
Geobacillus kaustophilus HTA426	GK1861	-176	4.6	CGTTATATTTTCTAACG
		-123	3.9	TGTAAATAAAATTAACA

Position: -99 Score: 4.6 Sequence: TGTTAGAAAATTTAAAA Locus tag: Aflv_2133
	Aflv_2133	-99	4.6	TGTTAGAAAATTTAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dppE
Ortholog function: Oligopeptide ABC transporter (oligopeptide-binding protein)
Anoxybacillus flavithermus WK1	Aflv_2133	-127	4	TGTGAACAAACCTCACA
		-99	4.6	TGTTAGAAAATTTAAAA
Geobacillus kaustophilus HTA426	GK0811	-423	4.4	TGTCAAAATTATTAACA
		-173	4.2	TTTCAAATATACTAACA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of TnrA regulog to Anoxybacillus flavithermus WK1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --