Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of CymR regulog to Bacillus thuringiensis str. Al Hakam

Reference regulog properties
Source regulog: CymR - Bacillales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Cysteine metabolism
Effector: O-acetyl-L-serine; CysK, cysteine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus thuringiensis str. Al Hakam
Orthologous TF(s) BALH_3980
Regulated genes 5
Built upon 65 sites [see more]
Predicted regulatory interactions in Bacillus thuringiensis str. Al Hakam
Locus tag Position Score Sequence
Position: -21
Score: 4.9
Sequence: CAAAACCAATAAAAATACTCGGTGTTA
Locus tag: BALH_0066
BALH_0066 -21 4.9 CAAAACCAATAAAAATACTCGGTGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysK
Ortholog function: Cysteine synthase (EC 2.5.1.47)
Bacillus subtilis subsp. subtilis str. 168 BSU00730 -39 5.4 TAATACCAATACAAATAGTCGGAAATT
Bacillus amyloliquefaciens FZB42 RBAM_000840 -39 5.8 TAATACCAATAAATTTAGTCGGAAATT
Bacillus pumilus SAFR-032 BPUM_0057 -40 4.6 TtAaTaCaATaAAATTAcTcGGAgaTA
Bacillus licheniformis DSM 13 BLi00089 -38 5.6 TAATCCCAATAAAATTACTCGGAAATT
Anoxybacillus flavithermus WK1 Aflv_0065 -30 5 CAAATTCTATAAAAATACTCGGGATTA
Geobacillus kaustophilus HTA426 GK0065 -38 4.7 CAAAGTCGATAAAATTAATGGGGATTA
Bacillus cereus ATCC 14579 BC0075 -39 5.3 TAAAACCAATAAAAATACTCGGTGTTA
Bacillus halodurans C-125 BH0088 -39 5.2 GAAAACCAATAAATTTACTTGGGATTA
Bacillus clausii KSM-K16 ABC0109 -42 4.9 TAAAACCAATGAAGATACTAGGGATTG
Oceanobacillus iheyensis HTE831 OB0084 -41 6 TAAATCTTATAAAAATACTTGGAATTA
Paenibacillus sp. JDR-2 Pjdr2_0074 -44 5.7 AAAAACCAACTAAATTAGTCGGAATAA
Position: -66
Score: 5.7
Sequence: TAAAACCTAGTTGACTTATCGGAAATA
Locus tag: BALH_2614
BALH_2614 -66 5.7 TAAAACCTAGTTGACTTATCGGAAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ssuB
Ortholog function: Aliphatic sulfonate ABC transporter (ATP-binding protein)
Bacillus subtilis subsp. subtilis str. 168 BSU08830 -167 4.6 TAAAAAAGAGTTGACATATCGGAATAA
Bacillus cereus ATCC 14579 BC2912 -174 5.7 TAAAACCTAGTTGACTTATCGGAAATA
Paenibacillus sp. JDR-2 Pjdr2_0756 -70 5.3 TAATTCCAACTATTCCAATAAGGAAAA
Position: -10
Score: 5.4
Sequence: TAAAACCTAGTTGATTTATACGATTAA
Locus tag: BALH_2745
BALH_2745 -10 5.4 TAAAACCTAGTTGATTTATACGATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytnM
Ortholog function: Hypothetical protein
Bacillus subtilis subsp. subtilis str. 168 BSU29280 -54 5.7 AAAAGCTTAGTAAACAAATAGGAATTA
Geobacillus kaustophilus HTA426 GK1638 -80 5.2 AAATTCATAGTTGACATCTATGAATAA
Bacillus cereus ATCC 14579 BC3050 -136 5.4 TAAAACCTAGTTGATTTATACGATTAA
Position: -27
Score: 5.4
Sequence: AATTCCCTAGTTGACTTATAGGTTTTA
Locus tag: BALH_3843
BALH_3843 -27 5.4 AATTCCCTAGTTGACTTATAGGTTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhcL
Ortholog function: Sodium-cystine symporter
Bacillus subtilis subsp. subtilis str. 168 BSU09130 -73 5.2 TAATTCGCACTTGACCCATCGGAATTA
Bacillus licheniformis DSM 13 BLi00975 -77 5.1 TAATTCCTACTTGACCAATCAGGTTTG
Bacillus cereus ATCC 14579 BC4242 -72 5.5 AATTTCATAGTTGACTTATAGGTTTTA
-39 4.8 TATATTCTATATAACAGATTGGAATTA
Bacillus clausii KSM-K16 ABC2897 -78 5.2 TAATTCCCACTTGACTCATATGATTAT
Oceanobacillus iheyensis HTE831 OB2714 -56 6.2 TAATTCGTAGTAAATTAATTGGAATTA
Paenibacillus sp. JDR-2 Pjdr2_6037 -148 5.1 AATTCCCCATAGAAATAGTCGGATTTA
-41 5 TAATTCCAATCAAACAACTTGGATTAG
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