Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of AraR regulog to Bacillus megaterium DSM319

Reference regulog properties
Source regulog: AraR - Bacillales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus megaterium DSM319
Orthologous TF(s) BMD_3533
Regulated genes 2
Built upon 43 sites [see more]
Predicted regulatory interactions in Bacillus megaterium DSM319
Locus tag Position Score Sequence
Position: -290
Score: 5.3
Sequence: AAATTTGTATGGACATATTT
Position: -122
Score: 5.8
Sequence: ACAAATGTACGTACAAATAA
Locus tag: BMD_3532
BMD_3532 -290 5.3 AAATTTGTATGGACATATTT
-122 5.8 ACAAATGTACGTACAAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araK
Ortholog function: Ribulokinase (EC 2.7.1.16)
Bacillus pumilus SAFR-032 BPUM_2329 -102 6.1 ACATATGTACGTACAAATAT
Bacillus licheniformis DSM 13 BLi02062 -138 5 ATATTTATATGAACATATTA
-106 5.8 ACATATGTACGTACAAAAAA
Oceanobacillus iheyensis HTE831 OB2799 -152 5.9 TAATTTGTACGTATATATAT
-119 5.4 ACAAATGTACGTACAATAAT
Paenibacillus sp. JDR-2 Pjdr2_4209 -100 4.8 TCACATGTACATACAAGTTA
Position: -236
Score: 5.8
Sequence: TTATTTGTACGTACATTTGT
Position: -68
Score: 5.3
Sequence: AAATATGTCCATACAAATTT
Locus tag: BMD_3533
BMD_3533 -236 5.8 TTATTTGTACGTACATTTGT
-68 5.3 AAATATGTCCATACAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araR
Ortholog function: Transcriptional repressor of arabinoside utilization, GntR family
Bacillus subtilis subsp. subtilis str. 168 BSU33970 -91 5.5 TCAATTGTACGTACTTATAT
-48 6 TAATTAGTACGTACAAATAT
Bacillus amyloliquefaciens FZB42 RBAM_031330 -167 5.6 ACATTTGTACGTACTTATGA
-124 5.4 AAATTAGTACGCACAAATAA
Bacillus pumilus SAFR-032 BPUM_2330 -191 6.1 ATATTTGTACGTACATATGT
Bacillus licheniformis DSM 13 BLi02061 -192 5.8 TTTTTTGTACGTACATATGT
-160 5 TAATATGTTCATATAAATAT
Anoxybacillus flavithermus WK1 Aflv_0528 -81 5.9 AAATATATACGTACAAATAA
Geobacillus kaustophilus HTA426 GK1907 -75 5 ATAATGATACGGACAAATAA
Bacillus halodurans C-125 BH1875 -36 5.2 TCATTTGTACGTATAAGTTG
Oceanobacillus iheyensis HTE831 OB2800 -203 5.4 ATTATTGTACGTACATTTGT
-170 5.9 ATATATATACGTACAAATTA
-63 5.3 AAATATGTACATACAAGTAT
Paenibacillus sp. JDR-2 Pjdr2_4208 -100 4.8 TCACATGTACATACAAGTTA
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