Propagation of CymR regulog to Bacillus megaterium DSM319

Reference regulog properties
Source regulog:	CymR - Bacillales
Regulator type:	Transcription factor
Regulator family:	Rrf2
Regulation mode:	repressor
Biological process:	Cysteine metabolism
Effector:	O-acetyl-L-serine; CysK, cysteine synthetase
Phylum:	Firmicutes
Propagated regulon:
Target genome	Bacillus megaterium DSM319
Orthologous TF(s)	BMD_4606
Regulated genes	15

Built upon 65 sites [see more]

Predicted regulatory interactions in *Bacillus megaterium DSM319*
	Locus tag	Position	Score	Sequence
Position: -38 Score: 4.9 Sequence: CAAAATCAATAAAATTAGTTGGTATTA Locus tag: BMD_0092
	BMD_0092	-38	4.9	CAAAATCAATAAAATTAGTTGGTATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysK
Ortholog function: Cysteine synthase (EC 2.5.1.47)
Bacillus subtilis subsp. subtilis str. 168	BSU00730	-39	5.4	TAATACCAATACAAATAGTCGGAAATT
Bacillus amyloliquefaciens FZB42	RBAM_000840	-39	5.8	TAATACCAATAAATTTAGTCGGAAATT
Bacillus pumilus SAFR-032	BPUM_0057	-40	4.6	TtAaTaCaATaAAATTAcTcGGAgaTA
Bacillus licheniformis DSM 13	BLi00089	-38	5.6	TAATCCCAATAAAATTACTCGGAAATT
Anoxybacillus flavithermus WK1	Aflv_0065	-30	5	CAAATTCTATAAAAATACTCGGGATTA
Geobacillus kaustophilus HTA426	GK0065	-38	4.7	CAAAGTCGATAAAATTAATGGGGATTA
Bacillus cereus ATCC 14579	BC0075	-39	5.3	TAAAACCAATAAAAATACTCGGTGTTA
Bacillus halodurans C-125	BH0088	-39	5.2	GAAAACCAATAAATTTACTTGGGATTA
Bacillus clausii KSM-K16	ABC0109	-42	4.9	TAAAACCAATGAAGATACTAGGGATTG
Oceanobacillus iheyensis HTE831	OB0084	-41	6	TAAATCTTATAAAAATACTTGGAATTA
Paenibacillus sp. JDR-2	Pjdr2_0074	-44	5.7	AAAAACCAACTAAATTAGTCGGAATAA

Position: -103 Score: 5.6 Sequence: TAATACTTAGTATTTTTATTGGAATTG Locus tag: BMD_0171
	BMD_0171	-103	5.6	TAATACTTAGTATTTTTATTGGAATTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytlI
Ortholog function: Transcriptional regulator, LysR family
Bacillus subtilis subsp. subtilis str. 168	BSU29400	-125	5.7	TAATTCCTATTTGTTTACTAAGCTTTT
Bacillus amyloliquefaciens FZB42	RBAM_030860	-100	5.3	TAATTCCAATTTGTTTACTAAGCTTTG

Position: -62 Score: 5.5 Sequence: TAATTCCTAGTAAACTTATAAGCTAAA Locus tag: BMD_1183
	BMD_1183	-62	5.5	TAATTCCTAGTAAACTTATAAGCTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yxeL
Ortholog function: Putative acetyltransferase
Bacillus subtilis subsp. subtilis str. 168	BSU39510	-82	5.6	TTATTCATATTAAACGACTAGGAATAT
Bacillus amyloliquefaciens FZB42	RBAM_003910	-85	6	TTATTCTTATAAAATTACTAGGAAATA
Bacillus pumilus SAFR-032	BPUM_0346	-84	5.5	TAAAACCGATTAATTCAATCAGAAAAA

Position: -162 Score: 5.3 Sequence: TAAAACCTAGTTGACTTATTGGTATTG Locus tag: BMD_1992
	BMD_1992	-162	5.3	TAAAACCTAGTTGACTTATTGGTATTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhcL
Ortholog function: Sodium-cystine symporter
Bacillus subtilis subsp. subtilis str. 168	BSU09130	-73	5.2	TAATTCGCACTTGACCCATCGGAATTA
Bacillus licheniformis DSM 13	BLi00975	-77	5.1	TAATTCCTACTTGACCAATCAGGTTTG
Bacillus cereus ATCC 14579	BC4242	-72	5.5	AATTTCATAGTTGACTTATAGGTTTTA
		-39	4.8	TATATTCTATATAACAGATTGGAATTA
Bacillus clausii KSM-K16	ABC2897	-78	5.2	TAATTCCCACTTGACTCATATGATTAT
Oceanobacillus iheyensis HTE831	OB2714	-56	6.2	TAATTCGTAGTAAATTAATTGGAATTA
Paenibacillus sp. JDR-2	Pjdr2_6037	-148	5.1	AATTCCCCATAGAAATAGTCGGATTTA
		-41	5	TAATTCCAATCAAACAACTTGGATTAG

Position: -302 Score: 4.9 Sequence: TAATCCCTACTTGACATATAGGTAAAG Locus tag: BMD_2076
	BMD_2076	-302	4.9	TAATCCCTACTTGACATATAGGTAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH3126
Ortholog function: Hypothetical protein
Bacillus halodurans C-125	BH3126	-142	4.8	TAAAACCCACTTGACAGATGGGGATTA
		-50	4.6	TAAAACAGACTTTTCCGATCTGTTTTA
Paenibacillus sp. JDR-2	Pjdr2_4820	-96	4.7	CATAACCAACTAAACAGGTAGGAATAA

Position: -210 Score: 5 Sequence: AAAAACCTAGTTGACTAATAGGTAAAG Position: -126 Score: 4.9 Sequence: TCTTACGAATAAATTTAATAAGAATAA Locus tag: BMD_2078
	BMD_2078	-210	5	AAAAACCTAGTTGACTAATAGGTAAAG
		-126	4.9	TCTTACGAATAAATTTAATAAGAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: subI
Ortholog function: Sulfate ABC transporter (sulfate-binding protein)
Bacillus cereus ATCC 14579	BC1090	-158	5.4	AAATTCCAAGTTGACACATATGAATTA
Bacillus cereus ATCC 14579	BC1091	-158	5.4	AAATTCCAAGTTGACACATATGAATTA
Bacillus halodurans C-125	BH3127	-142	4.8	TAAAACCCACTTGACAGATGGGGATTA
		-50	4.6	TAAAACAGACTTTTCCGATCTGTTTTA
Paenibacillus sp. JDR-2	Pjdr2_4823	-96	4.7	CATAACCAACTAAACAGGTAGGAATAA

Position: -180 Score: 5.1 Sequence: CAATTCATACTTGACTTATAGGTTAAA Locus tag: BMD_2912
	BMD_2912	-180	5.1	CAATTCATACTTGACTTATAGGTTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ssuD
Ortholog function: Alkanesulfonate monooxygenase (EC 1.14.14.5)
Bacillus subtilis subsp. subtilis str. 168	BSU08860	-167	4.6	TAAAAAAGAGTTGACATATCGGAATAA
Bacillus cereus ATCC 14579	BC2909	-174	5.7	TAAAACCTAGTTGACTTATCGGAAATA

Position: -141 Score: 4.9 Sequence: TAAATTTGATATAATCTATAGGAATAA Locus tag: BMD_3122
	BMD_3122	-141	4.9	TAAATTTGATATAATCTATAGGAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysJ
Ortholog function: Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2)
Bacillus licheniformis DSM 13	BLi01302	-105	5.5	TAAAACCGATTTGATTTATAGGAATAG
Anoxybacillus flavithermus WK1	Aflv_1597	-48	5.4	TAAAACATACTTGATTTATAGGAATAG
Bacillus halodurans C-125	BH0609	-87	5.7	TAAAACCAATTTGACTTATCGGAATAA
Bacillus clausii KSM-K16	ABC0618	-265	4.9	AAATACCGAGTTTGTTAATCAGGATAA
Oceanobacillus iheyensis HTE831	OB1653	-98	5.4	CAATTCACATTGTATTACTATGAATTA

Position: -127 Score: 5.1 Sequence: TAAAACACAGTTGACAAATCGGATTAA Locus tag: BMD_4703
	BMD_4703	-127	5.1	TAAAACACAGTTGACAAATCGGATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ssuB
Ortholog function: Aliphatic sulfonate ABC transporter (ATP-binding protein)
Bacillus subtilis subsp. subtilis str. 168	BSU08830	-167	4.6	TAAAAAAGAGTTGACATATCGGAATAA
Bacillus cereus ATCC 14579	BC2912	-174	5.7	TAAAACCTAGTTGACTTATCGGAAATA
Paenibacillus sp. JDR-2	Pjdr2_0756	-70	5.3	TAATTCCAACTATTCCAATAAGGAAAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of CymR regulog to Bacillus megaterium DSM319

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --