Propagation of CymR regulog to Bacillus megaterium DSM319
| Source regulog: | CymR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Cysteine metabolism |
| Effector: | O-acetyl-L-serine; CysK, cysteine synthetase |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus megaterium DSM319 |
| Orthologous TF(s) | BMD_4606 |
| Regulated genes | 15 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -38
Score: 4.9 Sequence: CAAAATCAATAAAATTAGTTGGTATTA
Locus tag: BMD_0092
|
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| BMD_0092 | -38 | 4.9 | CAAAATCAATAAAATTAGTTGGTATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysK | ||||
| Ortholog function: Cysteine synthase (EC 2.5.1.47) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU00730 | -39 | 5.4 | TAATACCAATACAAATAGTCGGAAATT |
| Bacillus amyloliquefaciens FZB42 | RBAM_000840 | -39 | 5.8 | TAATACCAATAAATTTAGTCGGAAATT |
| Bacillus pumilus SAFR-032 | BPUM_0057 | -40 | 4.6 | TtAaTaCaATaAAATTAcTcGGAgaTA |
| Bacillus licheniformis DSM 13 | BLi00089 | -38 | 5.6 | TAATCCCAATAAAATTACTCGGAAATT |
| Anoxybacillus flavithermus WK1 | Aflv_0065 | -30 | 5 | CAAATTCTATAAAAATACTCGGGATTA |
| Geobacillus kaustophilus HTA426 | GK0065 | -38 | 4.7 | CAAAGTCGATAAAATTAATGGGGATTA |
| Bacillus cereus ATCC 14579 | BC0075 | -39 | 5.3 | TAAAACCAATAAAAATACTCGGTGTTA |
| Bacillus halodurans C-125 | BH0088 | -39 | 5.2 | GAAAACCAATAAATTTACTTGGGATTA |
| Bacillus clausii KSM-K16 | ABC0109 | -42 | 4.9 | TAAAACCAATGAAGATACTAGGGATTG |
| Oceanobacillus iheyensis HTE831 | OB0084 | -41 | 6 | TAAATCTTATAAAAATACTTGGAATTA |
| Paenibacillus sp. JDR-2 | Pjdr2_0074 | -44 | 5.7 | AAAAACCAACTAAATTAGTCGGAATAA |
|
Position: -103
Score: 5.6 Sequence: TAATACTTAGTATTTTTATTGGAATTG
Locus tag: BMD_0171
|
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| BMD_0171 | -103 | 5.6 | TAATACTTAGTATTTTTATTGGAATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytlI | ||||
| Ortholog function: Transcriptional regulator, LysR family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU29400 | -125 | 5.7 | TAATTCCTATTTGTTTACTAAGCTTTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_030860 | -100 | 5.3 | TAATTCCAATTTGTTTACTAAGCTTTG |
|
Position: -62
Score: 5.5 Sequence: TAATTCCTAGTAAACTTATAAGCTAAA
Locus tag: BMD_1183
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| BMD_1183 | -62 | 5.5 | TAATTCCTAGTAAACTTATAAGCTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yxeL | ||||
| Ortholog function: Putative acetyltransferase | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU39510 | -82 | 5.6 | TTATTCATATTAAACGACTAGGAATAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_003910 | -85 | 6 | TTATTCTTATAAAATTACTAGGAAATA |
| Bacillus pumilus SAFR-032 | BPUM_0346 | -84 | 5.5 | TAAAACCGATTAATTCAATCAGAAAAA |
|
Position: -162
Score: 5.3 Sequence: TAAAACCTAGTTGACTTATTGGTATTG
Locus tag: BMD_1992
|
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| BMD_1992 | -162 | 5.3 | TAAAACCTAGTTGACTTATTGGTATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhcL | ||||
| Ortholog function: Sodium-cystine symporter | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU09130 | -73 | 5.2 | TAATTCGCACTTGACCCATCGGAATTA |
| Bacillus licheniformis DSM 13 | BLi00975 | -77 | 5.1 | TAATTCCTACTTGACCAATCAGGTTTG |
| Bacillus cereus ATCC 14579 | BC4242 | -72 | 5.5 | AATTTCATAGTTGACTTATAGGTTTTA |
| -39 | 4.8 | TATATTCTATATAACAGATTGGAATTA | ||
| Bacillus clausii KSM-K16 | ABC2897 | -78 | 5.2 | TAATTCCCACTTGACTCATATGATTAT |
| Oceanobacillus iheyensis HTE831 | OB2714 | -56 | 6.2 | TAATTCGTAGTAAATTAATTGGAATTA |
| Paenibacillus sp. JDR-2 | Pjdr2_6037 | -148 | 5.1 | AATTCCCCATAGAAATAGTCGGATTTA |
| -41 | 5 | TAATTCCAATCAAACAACTTGGATTAG | ||
|
Position: -302
Score: 4.9 Sequence: TAATCCCTACTTGACATATAGGTAAAG
Locus tag: BMD_2076
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| BMD_2076 | -302 | 4.9 | TAATCCCTACTTGACATATAGGTAAAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BH3126 | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus halodurans C-125 | BH3126 | -142 | 4.8 | TAAAACCCACTTGACAGATGGGGATTA |
| -50 | 4.6 | TAAAACAGACTTTTCCGATCTGTTTTA | ||
| Paenibacillus sp. JDR-2 | Pjdr2_4820 | -96 | 4.7 | CATAACCAACTAAACAGGTAGGAATAA |
|
Position: -210
Score: 5 Sequence: AAAAACCTAGTTGACTAATAGGTAAAG
Position: -126
Score: 4.9 Sequence: TCTTACGAATAAATTTAATAAGAATAA
Locus tag: BMD_2078
|
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| BMD_2078 | -210 | 5 | AAAAACCTAGTTGACTAATAGGTAAAG | |
| -126 | 4.9 | TCTTACGAATAAATTTAATAAGAATAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: subI | ||||
| Ortholog function: Sulfate ABC transporter (sulfate-binding protein) | ||||
| Bacillus cereus ATCC 14579 | BC1090 | -158 | 5.4 | AAATTCCAAGTTGACACATATGAATTA |
| Bacillus cereus ATCC 14579 | BC1091 | -158 | 5.4 | AAATTCCAAGTTGACACATATGAATTA |
| Bacillus halodurans C-125 | BH3127 | -142 | 4.8 | TAAAACCCACTTGACAGATGGGGATTA |
| -50 | 4.6 | TAAAACAGACTTTTCCGATCTGTTTTA | ||
| Paenibacillus sp. JDR-2 | Pjdr2_4823 | -96 | 4.7 | CATAACCAACTAAACAGGTAGGAATAA |
|
Position: -180
Score: 5.1 Sequence: CAATTCATACTTGACTTATAGGTTAAA
Locus tag: BMD_2912
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| BMD_2912 | -180 | 5.1 | CAATTCATACTTGACTTATAGGTTAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ssuD | ||||
| Ortholog function: Alkanesulfonate monooxygenase (EC 1.14.14.5) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU08860 | -167 | 4.6 | TAAAAAAGAGTTGACATATCGGAATAA |
| Bacillus cereus ATCC 14579 | BC2909 | -174 | 5.7 | TAAAACCTAGTTGACTTATCGGAAATA |
|
Position: -141
Score: 4.9 Sequence: TAAATTTGATATAATCTATAGGAATAA
Locus tag: BMD_3122
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| BMD_3122 | -141 | 4.9 | TAAATTTGATATAATCTATAGGAATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysJ | ||||
| Ortholog function: Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) | ||||
| Bacillus licheniformis DSM 13 | BLi01302 | -105 | 5.5 | TAAAACCGATTTGATTTATAGGAATAG |
| Anoxybacillus flavithermus WK1 | Aflv_1597 | -48 | 5.4 | TAAAACATACTTGATTTATAGGAATAG |
| Bacillus halodurans C-125 | BH0609 | -87 | 5.7 | TAAAACCAATTTGACTTATCGGAATAA |
| Bacillus clausii KSM-K16 | ABC0618 | -265 | 4.9 | AAATACCGAGTTTGTTAATCAGGATAA |
| Oceanobacillus iheyensis HTE831 | OB1653 | -98 | 5.4 | CAATTCACATTGTATTACTATGAATTA |
|
Position: -127
Score: 5.1 Sequence: TAAAACACAGTTGACAAATCGGATTAA
Locus tag: BMD_4703
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| BMD_4703 | -127 | 5.1 | TAAAACACAGTTGACAAATCGGATTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ssuB | ||||
| Ortholog function: Aliphatic sulfonate ABC transporter (ATP-binding protein) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU08830 | -167 | 4.6 | TAAAAAAGAGTTGACATATCGGAATAA |
| Bacillus cereus ATCC 14579 | BC2912 | -174 | 5.7 | TAAAACCTAGTTGACTTATCGGAAATA |
| Paenibacillus sp. JDR-2 | Pjdr2_0756 | -70 | 5.3 | TAATTCCAACTATTCCAATAAGGAAAA |