Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of BkdR regulog to Bacillus megaterium DSM319

Reference regulog properties
Source regulog: BkdR - Bacillales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Branched-chain amino acid degradation
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus megaterium DSM319
Orthologous TF(s) BMD_4430
Regulated genes 2
Built upon 26 sites [see more]
Predicted regulatory interactions in Bacillus megaterium DSM319
Locus tag Position Score Sequence
Position: -228
Score: 5.8
Sequence: TGCAATTTATTGCA
Locus tag: BMD_4429
BMD_4429 -228 5.8 TGCAATTTATTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ptb
Ortholog function: Phosphate butyryltransferase (EC 2.3.1.19)
Bacillus subtilis subsp. subtilis str. 168 BSU24090 -132 5.6 TGCAATAATTTGCA
Bacillus amyloliquefaciens FZB42 RBAM_022370 -130 5.8 TGCAATAAATTGCA
Bacillus pumilus SAFR-032 BPUM_2148 -134 5.4 TGCAATAAAATGCA
-113 4.8 TGCAAAAAGTTGCG
Bacillus licheniformis DSM 13 BLi02586 -134 5.8 TGCAATAAATTGCA
-112 4.6 TGCAAAATCATGCA
Anoxybacillus flavithermus WK1 Aflv_0958 -117 5.2 TGCAAAAAGTTGCA
Geobacillus kaustophilus HTA426 GK2382 -148 5.2 TGCAATAATTTGCG
Bacillus cereus ATCC 14579 BC4163 -217 4.9 TGCAAAAAATAGCA
-203 5.4 TGCAATAAATTGCG
-184 5.8 TGCAATTTATTGCA
Position: -52
Score: 5.6
Sequence: TGCAATATTTTGCA
Locus tag: BMD_4430
BMD_4430 -52 5.6 TGCAATATTTTGCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bkdR
Ortholog function: Transcriptional regulator of isoleucine and valine utilization, Fis family
Bacillus subtilis subsp. subtilis str. 168 BSU24100 -61 5.6 TGCAAATTATTGCA
-31 4.7 TGCAAATTTTTTCA
Bacillus amyloliquefaciens FZB42 RBAM_022380 -61 5.6 TGCAAATTATTGCA
-31 4.7 TGCAAATTTTTTCA
Bacillus pumilus SAFR-032 BPUM_2149 -61 5.6 TGCAATTTTTTGCA
-31 4.7 TGCAAATTTTTTCA
Bacillus licheniformis DSM 13 BLi02587 -61 5.2 TGCAAATTGTTGCA
-31 4.7 TGCAAAATTTTTCA
Anoxybacillus flavithermus WK1 Aflv_0957 -23 5.6 TGCAAAAAATTGCA
Bacillus cereus ATCC 14579 BC4165 -41 4.7 TGAAAAAATTTGCA
Oceanobacillus iheyensis HTE831 OB1870 -27 5.2 TGCAAAATAATGCA