Propagation of LexA regulog to Bacillus megaterium DSM319
| Source regulog: | LexA - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus megaterium DSM319 |
| Orthologous TF(s) | BMD_4077 |
| Regulated genes | 10 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -8
Score: 4.9 Sequence: GAGAATATATGTTCGA
Locus tag: BMD_0288
|
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| BMD_0288 | -8 | 4.9 | GAGAATATATGTTCGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pcrA | ||||
| Ortholog function: ATP-dependent DNA helicase | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU06610 | -36 | 4.4 | TAGAACGTATGTTTTG |
| Bacillus amyloliquefaciens FZB42 | RBAM_007010 | -32 | 5.2 | TAGAACATATGTTTGA |
| Bacillus pumilus SAFR-032 | BPUM_0625 | -32 | 5.2 | TAGAACATAAGTTCGA |
| Bacillus licheniformis DSM 13 | BLi00715 | -33 | 5.2 | TAGAACATATGTTTGA |
| Anoxybacillus flavithermus WK1 | Aflv_0246 | -13 | 4.5 | GAGAACATATGTTTTG |
| Geobacillus kaustophilus HTA426 | GK0275 | -31 | 4.8 | TAGAACATATGTTTTG |
| Bacillus halodurans C-125 | BH0648 | -8 | 4.6 | AAGAACAAGTGTTTGG |
|
Position: -77
Score: 4.4 Sequence: TAAAACTTTTGTTTGG
Locus tag: BMD_0640
|
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| BMD_0640 | -77 | 4.4 | TAAAACTTTTGTTTGG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhjE | ||||
| Ortholog function: Alkaline phosphatase like protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_010700 | -128 | 4.4 | GAGAACCTTTGTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_0990 | -128 | 4.6 | TAGAACACACGTTCTT |
| Bacillus licheniformis DSM 13 | BLi01121 | -179 | 4.5 | AGGAACATTTGTTCTG |
| Anoxybacillus flavithermus WK1 | Aflv_2232 | -174 | 4.3 | GCGAACAAATGATCGA |
| 34 | 4.3 | TAAAACATATGCTTGA | ||
| Oceanobacillus iheyensis HTE831 | OB1179 | -166 | 4.7 | CAGATCATATGTTCGT |
|
Position: -178
Score: 4.9 Sequence: AGGAACATTTGTTCGA
Locus tag: BMD_1726
|
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| BMD_1726 | -178 | 4.9 | AGGAACATTTGTTCGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: recA | ||||
| Ortholog function: Recombination protein A | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU16940 | -87 | 4.7 | CCGAATATGCGTTCGC |
| Bacillus amyloliquefaciens FZB42 | RBAM_016780 | -86 | 4.7 | CCGAATATGCGTTCGC |
| Bacillus pumilus SAFR-032 | BPUM_1598 | -88 | 5.2 | TCGAATATGTGTTCGT |
| Bacillus licheniformis DSM 13 | BLi01918 | -259 | 4.3 | TCGAATTTCAGTTCGC |
| -86 | 4.8 | TCGAATATGCGTTCGC | ||
| Anoxybacillus flavithermus WK1 | Aflv_1530 | 34 | 4.7 | ACGAACATCTATTCGT |
| Geobacillus kaustophilus HTA426 | GK1295 | -85 | 4.4 | ACGAATGGACGTTCGT |
| Bacillus cereus ATCC 14579 | BC3779 | -85 | 5.1 | TCGAATAAATGTTCGA |
| Bacillus halodurans C-125 | BH2383 | -343 | 4 | AAAAATTCACGTTTGT |
| -121 | 4.9 | GCGAATAAATGTTCGT | ||
| Bacillus clausii KSM-K16 | ABC2199 | -132 | 5.3 | ACGAATAAATGTTCGT |
| Oceanobacillus iheyensis HTE831 | OB1624 | -82 | 4.4 | AAGAACATCCATTCGT |
| Paenibacillus sp. JDR-2 | Pjdr2_3379 | -297 | 3.9 | GCGAACAATAATTTGT |
| -84 | 4.9 | ACGAATGTATGTTCGA | ||
|
Position: -141
Score: 4.4 Sequence: AGAAACATACGTTCTG
Locus tag: BMD_2534
|
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| BMD_2534 | -141 | 4.4 | AGAAACATACGTTCTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: parE | ||||
| Ortholog function: Topoisomerase IV subunit B (EC 5.99.1.-) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU18090 | -220 | 4.9 | ACAAACATACGTTCTC |
| Bacillus amyloliquefaciens FZB42 | RBAM_017900 | -243 | 4.3 | GCGAACTCATGTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_1709 | -246 | 4.8 | TAGAACATTTGTTCTG |
| Anoxybacillus flavithermus WK1 | Aflv_1444 | -30 | 4.7 | AGAAACAAATGTTCTT |
| Geobacillus kaustophilus HTA426 | GK1751 | -40 | 4.1 | AGAAACAGGTGTTCTT |
| Bacillus cereus ATCC 14579 | BC3597 | -44 | 4.6 | AGAAACATATGTTCTG |
| Bacillus halodurans C-125 | BH2140 | -72 | 4.9 | CCGAACATGCGTTTGT |
| Bacillus clausii KSM-K16 | ABC1989 | -64 | 4.5 | CAGAACAAACATTCGT |
| Oceanobacillus iheyensis HTE831 | OB1693 | -57 | 4.6 | AAGAACAGTTGTTCTA |
| Paenibacillus sp. JDR-2 | Pjdr2_2492 | -172 | 4 | GCGAATTTATGTTATT |
|
Position: -130
Score: 5 Sequence: CAGAATATATGTTCTT
Position: -76
Score: 5.2 Sequence: TCGAACTTATGTTTGT
Locus tag: BMD_4077
|
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| BMD_4077 | -130 | 5 | CAGAATATATGTTCTT | |
| -76 | 5.2 | TCGAACTTATGTTTGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lexA | ||||
| Ortholog function: SOS-response transcriptional repressor | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU17850 | -139 | 4.2 | AGGAATGTTTGTTCGC |
| -102 | 4.4 | ACGAACAAACGTTTCT | ||
| -73 | 5.1 | TCGAACCTATGTTTGT | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_017650 | -140 | 4.5 | AAGAATGTTTGTTCGC |
| -103 | 4.4 | ACGAACAAACGTTTCT | ||
| -73 | 5.1 | TCGAACCTATGTTTGT | ||
| Bacillus pumilus SAFR-032 | BPUM_1686 | -142 | 4.6 | TAGAATGTGTGTTCGT |
| -103 | 4.4 | ACGAACAAACGTTTCT | ||
| -73 | 5.1 | TCGAACCTATGTTTGT | ||
| Bacillus licheniformis DSM 13 | BLi02032 | -346 | 4.1 | ATGAATTTGTGTTTGT |
| -141 | 4.2 | CAGAATGTTTGTTCGG | ||
| -103 | 4.6 | ACGAACAAATGTTTCT | ||
| -73 | 5.1 | TCGAACCTATGTTTGT | ||
| Anoxybacillus flavithermus WK1 | Aflv_1506 | -110 | 5.2 | TAGAACATTTGTTTGT |
| -82 | 4.8 | GAGAACTTTTGTTCGT | ||
| -53 | 5.2 | TCGAACTTATGTTTGT | ||
| Geobacillus kaustophilus HTA426 | GK1328 | -136 | 4.5 | TAGAATGTTTGTTCGC |
| -103 | 4.9 | AGGAACATTTGTTTGT | ||
| -74 | 5.1 | TCGAACCTATGTTTGT | ||
| Bacillus cereus ATCC 14579 | BC3690 | -70 | 5.2 | TCGAACTTATGTTTGT |
| Bacillus halodurans C-125 | BH2356 | -107 | 4.7 | AAGAACACTTGTTTGT |
| -78 | 4.9 | TAGAACTTATGTTTGC | ||
| Bacillus clausii KSM-K16 | ABC2167 | -107 | 4.6 | AGGAACAACTGTTCGT |
| -76 | 4.9 | TAGAACTTATGTTTGC | ||
| Oceanobacillus iheyensis HTE831 | OB1669 | -142 | 4.8 | CAGAACAATTGTTCTT |
| -107 | 4.6 | CCGAACATATGATCTT | ||
| -78 | 4.2 | TAGAACGAGTGTTTGC | ||
| Paenibacillus sp. JDR-2 | Pjdr2_2621 | -157 | 4.4 | CCGAACGTTTGTTCTG |
| -118 | 5.1 | ACGAACAAATGTTTGC | ||
| -72 | 5.1 | AAGAACTTATGTTTGT | ||
|
Position: -145
Score: 4.7 Sequence: ACGAACATTTATTCGC
Locus tag: BMD_4106
|
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| BMD_4106 | -145 | 4.7 | ACGAACATTTATTCGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: recA | ||||
| Ortholog function: Recombination protein A | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU16940 | -87 | 4.7 | CCGAATATGCGTTCGC |
| Bacillus amyloliquefaciens FZB42 | RBAM_016780 | -86 | 4.7 | CCGAATATGCGTTCGC |
| Bacillus pumilus SAFR-032 | BPUM_1598 | -88 | 5.2 | TCGAATATGTGTTCGT |
| Bacillus licheniformis DSM 13 | BLi01918 | -259 | 4.3 | TCGAATTTCAGTTCGC |
| -86 | 4.8 | TCGAATATGCGTTCGC | ||
| Anoxybacillus flavithermus WK1 | Aflv_1530 | 34 | 4.7 | ACGAACATCTATTCGT |
| Geobacillus kaustophilus HTA426 | GK1295 | -85 | 4.4 | ACGAATGGACGTTCGT |
| Bacillus cereus ATCC 14579 | BC3779 | -85 | 5.1 | TCGAATAAATGTTCGA |
| Bacillus halodurans C-125 | BH2383 | -343 | 4 | AAAAATTCACGTTTGT |
| -121 | 4.9 | GCGAATAAATGTTCGT | ||
| Bacillus clausii KSM-K16 | ABC2199 | -132 | 5.3 | ACGAATAAATGTTCGT |
| Oceanobacillus iheyensis HTE831 | OB1624 | -82 | 4.4 | AAGAACATCCATTCGT |
| Paenibacillus sp. JDR-2 | Pjdr2_3379 | -297 | 3.9 | GCGAACAATAATTTGT |
| -84 | 4.9 | ACGAATGTATGTTCGA | ||
|
Position: -112
Score: 3.9 Sequence: CAGAACGATTGTTCCT
Locus tag: BMD_4573
|
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| BMD_4573 | -112 | 3.9 | CAGAACGATTGTTCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sda | ||||
| Ortholog function: Sporulation inhibitor sda | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU25690 | -127 | 4.4 | CAGAACGATTGTTCTT |
| Bacillus amyloliquefaciens FZB42 | RBAM_023990 | -144 | 4.4 | CAGAACGATTGTTCTT |
| Bacillus pumilus SAFR-032 | BPUM_2304 | -145 | 4.4 | CAGAACGATTGTTCTT |
| Bacillus licheniformis DSM 13 | BLi02762 | -145 | 4.2 | CAGAACGATTGTTCTC |
| Anoxybacillus flavithermus WK1 | Aflv_0810 | -181 | 4 | AAAAACCGACGTTTTT |
| -57 | 4.4 | CAGAACGATTGTTCTT | ||
| Geobacillus kaustophilus HTA426 | GK2527 | -105 | 3.9 | CAGAACGGTTGTTCTC |
|
Position: -154
Score: 4.7 Sequence: GCGAATATGCGTTCGT
Locus tag: BMD_4714
|
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| BMD_4714 | -154 | 4.7 | GCGAATATGCGTTCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uvrC | ||||
| Ortholog function: Excinuclease ABC subunit C | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28490 | -59 | 5 | AAAAACAAACGTTCGT |
| Bacillus amyloliquefaciens FZB42 | RBAM_025550 | -62 | 5.2 | AAAAACAAATGTTCGT |
| Bacillus pumilus SAFR-032 | BPUM_2506 | -62 | 5.2 | TAAAACAAATGTTCGT |
| Bacillus cereus ATCC 14579 | BC4520 | -83 | 4.1 | AAGAACGTATGTTGGG |
| Paenibacillus sp. JDR-2 | Pjdr2_4818 | -329 | 4.3 | CGAAACATGCGTTCGA |
|
Position: -82
Score: 4.8 Sequence: ACGAATATCAGTTCGT
Locus tag: BMD_5069
|
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| BMD_5069 | -82 | 4.8 | ACGAATATCAGTTCGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uvrB | ||||
| Ortholog function: Excinuclease ABC subunit B | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU35170 | -93 | 4.9 | CCGAACTTTAGTTCGT |
| Bacillus amyloliquefaciens FZB42 | RBAM_032310 | -90 | 5 | TCGAACTTTAGTTCGT |
| Bacillus pumilus SAFR-032 | BPUM_3148 | -82 | 4.9 | CCGAACTTTAGTTCGT |
| Bacillus licheniformis DSM 13 | BLi03759 | -81 | 4.9 | CCGAACTTTAGTTCGT |
| Anoxybacillus flavithermus WK1 | Aflv_2547 | -81 | 5.1 | TAGAATATTTGTTCGT |
| Geobacillus kaustophilus HTA426 | GK3086 | -85 | 4.8 | ACGAATATGAGTTCGC |
| Bacillus cereus ATCC 14579 | BC5168 | -86 | 4.9 | CCGAATATCTGTTCGT |
| Bacillus halodurans C-125 | BH3595 | -91 | 4.9 | CAAAACAAACGTTCGT |
| Bacillus clausii KSM-K16 | ABC3059 | -337 | 4.4 | TAGTACGTATGTTCGT |
| Oceanobacillus iheyensis HTE831 | OB2488 | -70 | 4.7 | ACGAATACTTGTTCGT |