Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of PerR regulog to Bacillus megaterium DSM319

Reference regulog properties
Source regulog: PerR - Bacillales
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor
Biological process: Oxidative stress response; Peroxide stress response
Effector: Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus megaterium DSM319
Orthologous TF(s) BMD_0417
Regulated genes 8
Built upon 129 sites [see more]
Predicted regulatory interactions in Bacillus megaterium DSM319
Locus tag Position Score Sequence
Position: -57
Score: 4.4
Sequence: GTAGACTAATTATAA
Position: -48
Score: 5.4
Sequence: TTATAAGAATTATAA
Position: -31
Score: 4.2
Sequence: TAATAATACTTACAG
Locus tag: BMD_0417
BMD_0417 -57 4.4 GTAGACTAATTATAA
-48 5.4 TTATAAGAATTATAA
-31 4.2 TAATAATACTTACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: perR
Ortholog function: Transcriptional regulator of peroxide stress response, Fur family
Bacillus subtilis subsp. subtilis str. 168 BSU08730 -51 5 TTATAAACATTACAA
-34 4.2 TAAGAATTTTTTTTA
Bacillus amyloliquefaciens FZB42 RBAM_008820 -51 5.4 TTATAAACATTATAA
-34 4.4 TAATAATCTTTTTTA
Bacillus pumilus SAFR-032 BPUM_0827 -50 5.4 TTATAAAGATTATAA
Bacillus licheniformis DSM 13 BLi00900 -50 4.9 TTATAAACGTTATAA
-33 4.2 TAAGAATTTTTTTTA
Anoxybacillus flavithermus WK1 Aflv_0369 -38 5.5 TTATAAAAATTATAA
-15 5.5 TTATAATTTTTATAA
Geobacillus kaustophilus HTA426 GK0478 -61 5.5 TTATAAATATTATAA
-44 4.2 TGATAATTTTTTTCA
Bacillus cereus ATCC 14579 BC0518 -43 5.4 TTATAAGAATTATAA
Bacillus halodurans C-125 BH0951 -54 5.4 TTATAAAGATTATAA
Bacillus clausii KSM-K16 ABC1322 -50 5.2 TTATAATTAATATAA
Oceanobacillus iheyensis HTE831 OB0905 -66 5.3 TTATAAGGATTATAA
-49 4.3 TAATAATTTTATTAA
Paenibacillus sp. JDR-2 Pjdr2_1094 -209 4.1 TTGGAAGCATTACAA
Position: -142
Score: 4.9
Sequence: TAAAAGTAATTATAA
Locus tag: BMD_0714
BMD_0714 -142 4.9 TAAAAGTAATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: spxA
Ortholog function: Transcriptional regulator
Bacillus subtilis subsp. subtilis str. 168 BSU11500 -65 4.5 TTAGAGTAATTTCAA
Bacillus amyloliquefaciens FZB42 RBAM_011500 -90 4.3 GTATAATACCTATAA
-64 4.5 TTAAAGTCATTTCAA
Bacillus pumilus SAFR-032 BPUM_1077 -91 4.8 GTATAATCACTATAA
-65 4.9 TTAGAACAATTTTAA
Bacillus licheniformis DSM 13 BLi01238 -62 4.5 TTAGAGTTATTTCAA
Anoxybacillus flavithermus WK1 Aflv_2127 -75 5 TTAAAGTCATTTTAA
Geobacillus kaustophilus HTA426 GK0817 -165 4.5 TTAAAGTCATTTCAA
Bacillus cereus ATCC 14579 BC1188 -181 4.9 GTATAATGATTATAG
Oceanobacillus iheyensis HTE831 OB1213 -72 4.8 TTAGACTAATTTTAA
Position: -100
Score: 4.1
Sequence: CTAAAATATTTTTAT
Locus tag: BMD_1838
BMD_1838 -100 4.1 CTAAAATATTTTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjdI
Ortholog function: Hypothetical protein
Bacillus amyloliquefaciens FZB42 RBAM_024230 -57 5.1 TTATAATAACTATAG
Anoxybacillus flavithermus WK1 Aflv_2797 -120 4.3 AGATAAATATTATAA
Bacillus cereus ATCC 14579 BC3316 -107 4.2 TTATCAATATTTTTA
Position: -186
Score: 4.4
Sequence: TTATAATAGTTAGAG
Locus tag: BMD_4672
BMD_4672 -186 4.4 TTATAATAGTTAGAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemA
Ortholog function: Glutamyl-tRNA reductase (EC 1.2.1.70)
Bacillus subtilis subsp. subtilis str. 168 BSU28170 -79 6 TTATAATTATTATAA
-49 5.5 TTAGAATGATTATAA
Bacillus amyloliquefaciens FZB42 RBAM_025230 -69 5.9 TTATAATCATTATAA
-39 5.5 TTAGAATGATTATAA
Bacillus pumilus SAFR-032 BPUM_2458 -79 5.9 TTATAATCATTATAA
-49 5.5 TTGTAATTATTATAA
Bacillus licheniformis DSM 13 BLi02947 -78 4.4 TTATAATCGTTTTGA
-48 5.5 TTATAATCATTCTAA
Bacillus cereus ATCC 14579 BC4473 -175 5.9 TTATAATCATTATAA
Bacillus halodurans C-125 BH3048 -249 5.3 TAATAATAATTCTAA
-83 4.1 TTAGACATGTTATAA
Bacillus clausii KSM-K16 ABC2632 -93 4.1 TTAGACATGTTATAA
Oceanobacillus iheyensis HTE831 OB2070 -66 4.8 TTATAATAAATATTA
-49 5.1 TTATAATAATATTAA
Paenibacillus sp. JDR-2 Pjdr2_4440 -47 5.5 TTATAATCATTCTAA
Position: -92
Score: 6
Sequence: TTATAATAATTATAA
Locus tag: BMD_5226
BMD_5226 -92 6 TTATAATAATTATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: katA
Ortholog function: Catalase (EC 1.11.1.6)
Bacillus subtilis subsp. subtilis str. 168 BSU08820 -78 6 TTATAATAATTATAA
Bacillus amyloliquefaciens FZB42 RBAM_009090 -78 5.9 TTATAATCATTATAA
Bacillus licheniformis DSM 13 BLi04113 -87 6 TTATAATAATTATAA
Oceanobacillus iheyensis HTE831 OB0633 -98 5.2 TTAAAATAATTGTAA