Propagation of PerR regulog to Bacillus megaterium DSM319
| Source regulog: | PerR - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor |
| Biological process: | Oxidative stress response; Peroxide stress response |
| Effector: | Hydrogen peroxide; Manganese ion, (Mn2+); Iron ion, (Fe2+) |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Bacillus megaterium DSM319 |
| Orthologous TF(s) | BMD_0417 |
| Regulated genes | 8 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -57
Score: 4.4 Sequence: GTAGACTAATTATAA
Position: -48
Score: 5.4 Sequence: TTATAAGAATTATAA
Position: -31
Score: 4.2 Sequence: TAATAATACTTACAG
Locus tag: BMD_0417
|
||||
| BMD_0417 | -57 | 4.4 | GTAGACTAATTATAA | |
| -48 | 5.4 | TTATAAGAATTATAA | ||
| -31 | 4.2 | TAATAATACTTACAG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: perR | ||||
| Ortholog function: Transcriptional regulator of peroxide stress response, Fur family | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU08730 | -51 | 5 | TTATAAACATTACAA |
| -34 | 4.2 | TAAGAATTTTTTTTA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_008820 | -51 | 5.4 | TTATAAACATTATAA |
| -34 | 4.4 | TAATAATCTTTTTTA | ||
| Bacillus pumilus SAFR-032 | BPUM_0827 | -50 | 5.4 | TTATAAAGATTATAA |
| Bacillus licheniformis DSM 13 | BLi00900 | -50 | 4.9 | TTATAAACGTTATAA |
| -33 | 4.2 | TAAGAATTTTTTTTA | ||
| Anoxybacillus flavithermus WK1 | Aflv_0369 | -38 | 5.5 | TTATAAAAATTATAA |
| -15 | 5.5 | TTATAATTTTTATAA | ||
| Geobacillus kaustophilus HTA426 | GK0478 | -61 | 5.5 | TTATAAATATTATAA |
| -44 | 4.2 | TGATAATTTTTTTCA | ||
| Bacillus cereus ATCC 14579 | BC0518 | -43 | 5.4 | TTATAAGAATTATAA |
| Bacillus halodurans C-125 | BH0951 | -54 | 5.4 | TTATAAAGATTATAA |
| Bacillus clausii KSM-K16 | ABC1322 | -50 | 5.2 | TTATAATTAATATAA |
| Oceanobacillus iheyensis HTE831 | OB0905 | -66 | 5.3 | TTATAAGGATTATAA |
| -49 | 4.3 | TAATAATTTTATTAA | ||
| Paenibacillus sp. JDR-2 | Pjdr2_1094 | -209 | 4.1 | TTGGAAGCATTACAA |
|
Position: -142
Score: 4.9 Sequence: TAAAAGTAATTATAA
Locus tag: BMD_0714
|
||||
| BMD_0714 | -142 | 4.9 | TAAAAGTAATTATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: spxA | ||||
| Ortholog function: Transcriptional regulator | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU11500 | -65 | 4.5 | TTAGAGTAATTTCAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_011500 | -90 | 4.3 | GTATAATACCTATAA |
| -64 | 4.5 | TTAAAGTCATTTCAA | ||
| Bacillus pumilus SAFR-032 | BPUM_1077 | -91 | 4.8 | GTATAATCACTATAA |
| -65 | 4.9 | TTAGAACAATTTTAA | ||
| Bacillus licheniformis DSM 13 | BLi01238 | -62 | 4.5 | TTAGAGTTATTTCAA |
| Anoxybacillus flavithermus WK1 | Aflv_2127 | -75 | 5 | TTAAAGTCATTTTAA |
| Geobacillus kaustophilus HTA426 | GK0817 | -165 | 4.5 | TTAAAGTCATTTCAA |
| Bacillus cereus ATCC 14579 | BC1188 | -181 | 4.9 | GTATAATGATTATAG |
| Oceanobacillus iheyensis HTE831 | OB1213 | -72 | 4.8 | TTAGACTAATTTTAA |
|
Position: -100
Score: 4.1 Sequence: CTAAAATATTTTTAT
Locus tag: BMD_1838
|
||||
| BMD_1838 | -100 | 4.1 | CTAAAATATTTTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjdI | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus amyloliquefaciens FZB42 | RBAM_024230 | -57 | 5.1 | TTATAATAACTATAG |
| Anoxybacillus flavithermus WK1 | Aflv_2797 | -120 | 4.3 | AGATAAATATTATAA |
| Bacillus cereus ATCC 14579 | BC3316 | -107 | 4.2 | TTATCAATATTTTTA |
|
Position: -186
Score: 4.4 Sequence: TTATAATAGTTAGAG
Locus tag: BMD_4672
|
||||
| BMD_4672 | -186 | 4.4 | TTATAATAGTTAGAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemA | ||||
| Ortholog function: Glutamyl-tRNA reductase (EC 1.2.1.70) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU28170 | -79 | 6 | TTATAATTATTATAA |
| -49 | 5.5 | TTAGAATGATTATAA | ||
| Bacillus amyloliquefaciens FZB42 | RBAM_025230 | -69 | 5.9 | TTATAATCATTATAA |
| -39 | 5.5 | TTAGAATGATTATAA | ||
| Bacillus pumilus SAFR-032 | BPUM_2458 | -79 | 5.9 | TTATAATCATTATAA |
| -49 | 5.5 | TTGTAATTATTATAA | ||
| Bacillus licheniformis DSM 13 | BLi02947 | -78 | 4.4 | TTATAATCGTTTTGA |
| -48 | 5.5 | TTATAATCATTCTAA | ||
| Bacillus cereus ATCC 14579 | BC4473 | -175 | 5.9 | TTATAATCATTATAA |
| Bacillus halodurans C-125 | BH3048 | -249 | 5.3 | TAATAATAATTCTAA |
| -83 | 4.1 | TTAGACATGTTATAA | ||
| Bacillus clausii KSM-K16 | ABC2632 | -93 | 4.1 | TTAGACATGTTATAA |
| Oceanobacillus iheyensis HTE831 | OB2070 | -66 | 4.8 | TTATAATAAATATTA |
| -49 | 5.1 | TTATAATAATATTAA | ||
| Paenibacillus sp. JDR-2 | Pjdr2_4440 | -47 | 5.5 | TTATAATCATTCTAA |
|
Position: -92
Score: 6 Sequence: TTATAATAATTATAA
Locus tag: BMD_5226
|
||||
| BMD_5226 | -92 | 6 | TTATAATAATTATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: katA | ||||
| Ortholog function: Catalase (EC 1.11.1.6) | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU08820 | -78 | 6 | TTATAATAATTATAA |
| Bacillus amyloliquefaciens FZB42 | RBAM_009090 | -78 | 5.9 | TTATAATCATTATAA |
| Bacillus licheniformis DSM 13 | BLi04113 | -87 | 6 | TTATAATAATTATAA |
| Oceanobacillus iheyensis HTE831 | OB0633 | -98 | 5.2 | TTAAAATAATTGTAA |